RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	SYAP1	Q96A49	352 aa	Predicted RBP	21.32	■■□□□ 1
RAP1B-222	ENST00000540781	SYT15	Q9BQS2	421 aa		21.32	■■□□□ 1
RAP1B-222	ENST00000540781	ABCB6	Q9NP58	842 aa		21.32	■■□□□ 1
RAP1B-222	ENST00000540781	RMND1	Q9NWS8	449 aa		21.32	■■□□□ 1
RAP1B-222	ENST00000540781	CDH9	Q9ULB4	789 aa		21.32	■■□□□ 1
RAP1B-222	ENST00000540781	MYBPHL	A2RUH7	354 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	STAU1	O95793	577 aa	Known RBP	21.31	■■□□□ 1
RAP1B-222	ENST00000540781	PDGFRB	P09619	1106 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	FAM163B	P0C2L3	166 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	AOC1	P19801	751 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	NR2F2	P24468	414 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	CYP2F1	P24903	491 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	LMO2	P25791	158 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	NUBP1	P53384	320 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	RPL10A	P62906	217 aa	Known RBP	21.31	■■□□□ 1
RAP1B-222	ENST00000540781	DLG4	P78352	724 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	CLDN10	P78369	228 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	PFKP	Q01813	784 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	NFIL3	Q16649	462 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	CCDC142	Q17RM4	750 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	ARHGAP15	Q53QZ3	475 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	TDRD10	Q5VZ19	366 aa	Known RBP	21.31	■■□□□ 1
RAP1B-222	ENST00000540781	GAREM2	Q75VX8	874 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	MRPL45	Q9BRJ2	306 aa	Known RBP	21.31	■■□□□ 1
RAP1B-222	ENST00000540781	SNX25	Q9H3E2	840 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	TBC1D17	Q9HA65	648 aa		21.31	■■□□□ 1
RAP1B-222	ENST00000540781	CIZ1	Q9ULV3	898 aa	Predicted RBP	21.31	■■□□□ 1
RAP1B-222	ENST00000540781	PI15	O43692	258 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	ATP2C2	O75185	946 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	TACC1	O75410	805 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	CLSTN1	O94985	981 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	SMC2	O95347	1197 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	C4BPA	P04003	597 aa	Known RBP	21.3	■■□□□ 1
RAP1B-222	ENST00000540781	RPL13	P26373	211 aa	Known RBP	21.3	■■□□□ 1
RAP1B-222	ENST00000540781	CDC25C	P30307	473 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	GNL1	P36915	607 aa	Predicted RBP	21.3	■■□□□ 1
RAP1B-222	ENST00000540781	VIPR2	P41587	438 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	GPR15	P49685	360 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	PSMC1	P62191	440 aa	Known RBP	21.3	■■□□□ 1
RAP1B-222	ENST00000540781	GPR158	Q5T848	1215 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	FAM171B	Q6P995	826 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	OR6B3	Q8NGW1	331 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	TIGD1	Q96MW7	591 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	GCNA	Q96QF7	691 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	XYLT2	Q9H1B5	865 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	IL21	Q9HBE4	155 aa		21.3	■■□□□ 1
RAP1B-222	ENST00000540781	NXF1	Q9UBU9	619 aa	Known RBP	21.3	■■□□□ 1
RAP1B-222	ENST00000540781	MAPK13	O15264	365 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	PTPN5	P54829	565 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	NCOA4	Q13772	614 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	GRM2	Q14416	872 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	DDR2	Q16832	855 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	ZNF699	Q32M78	642 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	CFAP221	Q4G0U5	840 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	SLC44A4	Q53GD3	710 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	STXBP5	Q5T5C0	1151 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	SDHAF4	Q5VUM1	108 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	PHLDB3	Q6NSJ2	640 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	C4orf50	Q6ZRC1	276 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	SMYD4	Q8IYR2	804 aa	Predicted RBP	21.29	■■□□□ 1
RAP1B-222	ENST00000540781	FUBP3	Q96I24	572 aa	Known RBP eCLIP	21.29	■■□□□ 1
RAP1B-222	ENST00000540781	SHD	Q96IW2	340 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	GSDMA	Q96QA5	445 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	TRPV4	Q9HBA0	871 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	CRTAC1	Q9NQ79	661 aa		21.29	■■□□□ 1
RAP1B-222	ENST00000540781	MAGEC2	Q9UBF1	373 aa	Predicted RBP	21.29	■■□□□ 1
RAP1B-222	ENST00000540781	HOOK1	Q9UJC3	728 aa	Known RBP	21.29	■■□□□ 1
RAP1B-222	ENST00000540781	IKBKB	O14920	756 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	AKAP3	O75969	853 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	VNN1	O95497	513 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	CSH1	P0DML2	217 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	CSH2	P0DML3	217 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	VAMP7	P51809	220 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	CYP4F8	P98187	520 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	ADAM9	Q13443	819 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	MAPRE1	Q15691	268 aa	Known RBP	21.28	■■□□□ 1
RAP1B-222	ENST00000540781	MLF2	Q15773	248 aa	Predicted RBP	21.28	■■□□□ 1
RAP1B-222	ENST00000540781	ZACN	Q401N2	412 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	ZNF667	Q5HYK9	610 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	VIT	Q6UXI7	678 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	SCN4B	Q8IWT1	228 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	FAM186B	Q8IYM0	893 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	DEPDC1B	Q8WUY9	529 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	SMARCE1	Q969G3	411 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	MYLPF	Q96A32	169 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	E2F7	Q96AV8	911 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	TRMT61B	Q9BVS5	477 aa	Known RBP	21.28	■■□□□ 1
RAP1B-222	ENST00000540781	BRD9	Q9H8M2	597 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	VRTN	Q9H8Y1	702 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	MAGED2	Q9UNF1	606 aa	Predicted RBP	21.28	■■□□□ 1
RAP1B-222	ENST00000540781	PCDHA5	Q9Y5H7	936 aa		21.28	■■□□□ 1
RAP1B-222	ENST00000540781	GALR2	O43603	387 aa	Predicted RBP	21.27	■■□□□ 1
RAP1B-222	ENST00000540781	KRT13	P13646	458 aa		21.27	■■□□□ 1
RAP1B-222	ENST00000540781	HMGA1	P17096	107 aa	Known RBP	21.27	■■□□□ 1
RAP1B-222	ENST00000540781	PSMC3	P17980	439 aa		21.27	■■□□□ 1
RAP1B-222	ENST00000540781	PSMC2	P35998	433 aa	Known RBP	21.27	■■□□□ 1
RAP1B-222	ENST00000540781	MAGEA11	P43364	429 aa		21.27	■■□□□ 1
RAP1B-222	ENST00000540781	STARD6	P59095	220 aa		21.27	■■□□□ 1
RAP1B-222	ENST00000540781	NHLH1	Q02575	133 aa		21.27	■■□□□ 1
RAP1B-222	ENST00000540781	PRKCQ	Q04759	706 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms