RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 VCAM1P19320 739 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 RFX1P22670 979 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 THOC5Q13769 683 aaKnown RBP20.15■□□□□ 0.82
SMPD1-210ENST00000534405 ADRM1Q16186 407 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 HAUS6Q7Z4H7 955 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 CPXCR1Q8N123 301 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 OGFOD1Q8N543 542 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 ZNF398Q8TD17 642 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 ZNF341Q9BYN7 854 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 SLCO1B3Q9NPD5 702 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 ZNF277Q9NRM2 450 aaPredicted RBP20.15■□□□□ 0.82
SMPD1-210ENST00000534405 R3HDM2Q9Y2K5 976 aaKnown RBP20.15■□□□□ 0.82
SMPD1-210ENST00000534405 UBIAD1Q9Y5Z9 338 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 HTR3EA5X5Y0 456 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 GOLGA8IPA6NC78 632 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 GOLGA8JA6NMD2 632 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 SGPL1O95470 568 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 ADRB2P07550 413 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 CPA3P15088 417 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 CCDC25Q86WR0 208 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 XXYLT1Q8NBI6 393 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 FNDC8Q8TC99 324 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 MCUR1Q96AQ8 359 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 TMEM117Q9H0C3 514 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 PFDN4Q9NQP4 134 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 HOMER2Q9NSB8 354 aa20.14■□□□□ 0.82
SMPD1-210ENST00000534405 SLC16A4O15374 487 aa20.14■□□□□ 0.81
SMPD1-210ENST00000534405 CHRNB2P17787 502 aa20.14■□□□□ 0.81
SMPD1-210ENST00000534405 QARSP47897 775 aaKnown RBP20.14■□□□□ 0.81
SMPD1-210ENST00000534405 MTDHQ86UE4 582 aaKnown RBP20.14■□□□□ 0.81
SMPD1-210ENST00000534405 CPNE8Q86YQ8 564 aa20.14■□□□□ 0.81
SMPD1-210ENST00000534405 C12orf56Q8IXR9 622 aa20.14■□□□□ 0.81
SMPD1-210ENST00000534405 SRRM1Q8IYB3 904 aaKnown RBP20.14■□□□□ 0.81
SMPD1-210ENST00000534405 ZBED8Q8IZ13 594 aa20.14■□□□□ 0.81
SMPD1-210ENST00000534405 ANKRD35Q8N283 1001 aa20.14■□□□□ 0.81
SMPD1-210ENST00000534405 PRELID2Q8N945 189 aa20.14■□□□□ 0.81
SMPD1-210ENST00000534405 SPOCK2Q92563 424 aa20.14■□□□□ 0.81
SMPD1-210ENST00000534405 AAASQ9NRG9 546 aa20.14■□□□□ 0.81
SMPD1-210ENST00000534405 ASTN2O75129 1339 aaPredicted RBP20.14■□□□□ 0.81
SMPD1-210ENST00000534405 ATMINO43313 823 aaPredicted RBP20.13■□□□□ 0.81
SMPD1-210ENST00000534405 ZNF862O60290 1169 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 MAPTP10636 758 aaKnown RBP20.13■□□□□ 0.81
SMPD1-210ENST00000534405 CTNNA2P26232 953 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 YWHABP31946 246 aaKnown RBP20.13■□□□□ 0.81
SMPD1-210ENST00000534405 HADHBP55084 474 aaKnown RBP20.13■□□□□ 0.81
SMPD1-210ENST00000534405 TTC27Q6P3X3 843 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 RHOT2Q8IXI1 618 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 ZDHHC14Q8IZN3 488 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 KREMEN1Q96MU8 473 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 USP29Q9HBJ7 922 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 NUMBLQ9Y6R0 609 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 TMEM110-MUSTN1A8MSY1 372 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 ANKRD63C9JTQ0 380 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 BOLA2-SMG1P6H3BVE0 249 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 PYGMP11217 842 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 PEX3P56589 373 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 GTF2BQ00403 316 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 ADCY1Q08828 1119 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 TMEM53Q6P2H8 277 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 C3orf62Q6ZUJ4 267 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 NOP9Q86U38 636 aaKnown RBP20.13■□□□□ 0.81
SMPD1-210ENST00000534405 VPS52Q8N1B4 723 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 LARGE2Q8N3Y3 721 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 TMEM174Q8WUU8 243 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 EBF3Q9H4W6 596 aa20.13■□□□□ 0.81
SMPD1-210ENST00000534405 RAVER2Q9HCJ3 691 aaKnown RBP20.13■□□□□ 0.81
SMPD1-210ENST00000534405 KANSL1LA0AUZ9 987 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 EIF2AK2P19525 551 aaKnown RBP20.12■□□□□ 0.81
SMPD1-210ENST00000534405 VPS41P49754 854 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 RAP1GDS1P52306 607 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 MTMR1Q13613 665 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 TNIP1Q15025 636 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 PDK4Q16654 411 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 KYNUQ16719 465 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 PHLDB2Q86SQ0 1253 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 CBWD2Q8IUF1 395 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 NUP93Q8N1F7 819 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 SYTL5Q8TDW5 730 aaPredicted RBP20.12■□□□□ 0.81
SMPD1-210ENST00000534405 EPS8L1Q8TE68 723 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 SEMA4DQ92854 862 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 ELMO3Q96BJ8 720 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 NSL1Q96IY1 281 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 PRICKLE1Q96MT3 831 aaPredicted RBP20.12■□□□□ 0.81
SMPD1-210ENST00000534405 TAAR1Q96RJ0 339 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 NOCTQ9UK39 431 aaKnown RBP20.12■□□□□ 0.81
SMPD1-210ENST00000534405 P4HA2O15460 535 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 ADSSP30520 456 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 MXI1P50539 228 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 ALCAMQ13740 583 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 PCNX4Q63HM2 1172 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 PLA2G4FQ68DD2 849 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 GRAMD4Q6IC98 578 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 NIPA1Q7RTP0 329 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 DQX1Q8TE96 717 aaKnown RBP20.12■□□□□ 0.81
SMPD1-210ENST00000534405 DENND1AQ8TEH3 1009 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 ARL8BQ9NVJ2 186 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 ZNF180Q9UJW8 692 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 NAALADL1Q9UQQ1 740 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 ZNF711Q9Y462 761 aa20.12■□□□□ 0.81
SMPD1-210ENST00000534405 TTC4O95801 387 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms