RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 TCHHQ07283 1943 aa13.34□□□□□ -0.27
CAPRIN1-213ENST00000533562 SHISA7A6NL88 538 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 SOBPA7XYQ1 873 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 ARNTLO00327 626 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 PRPF40AO75400 957 aaKnown RBP13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 CSH1P0DML2 217 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 CSH2P0DML3 217 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 CCNE1P24864 410 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 DDX6P26196 483 aaKnown RBP eCLIP13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 PCSK1P29120 753 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 NRLP54845 237 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 RPL10AP62906 217 aaKnown RBP13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 MTAPQ13126 283 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 FOXD4L6Q3SYB3 417 aaPredicted RBP13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 FAM26FQ5R3K3 315 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 FOXD4L3Q6VB84 417 aaPredicted RBP13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 ZNF687Q8N1G0 1237 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 CELF5Q8N6W0 485 aaKnown RBP13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 GLIS3Q8NEA6 775 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 CXorf38Q8TB03 319 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 BPIFB1Q8TDL5 484 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 LEO1Q8WVC0 666 aaPredicted RBP13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 RSPRY1Q96DX4 576 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 PI4K2AQ9BTU6 479 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 MKNK1Q9BUB5 465 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 FAM126AQ9BYI3 521 aaPredicted RBP13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 IL21Q9HBE4 155 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 ABCB6Q9NP58 842 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 ZSCAN32Q9NX65 697 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 HSPBP1Q9NZL4 362 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 SIX4Q9UIU6 781 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 DMXL1Q9Y485 3027 aa13.33□□□□□ -0.28
CAPRIN1-213ENST00000533562 F13A1P00488 732 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 HOXD13P35453 343 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 AVPR1AP37288 418 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 CYP4F8P98187 520 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 LRRC32Q14392 662 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 INTS6LQ5JSJ4 861 aaKnown RBP13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 UNC13DQ70J99 1090 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 EPM2AIP1Q7L775 607 aaPredicted RBP13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 HS2ST1Q7LGA3 356 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 RALGPS2Q86X27 583 aaPredicted RBP13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 CBWD2Q8IUF1 395 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 WDR49Q8IV35 697 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 ADGRF2Q8IZF7 708 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 CMTM8Q8IZV2 173 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 RDH13Q8NBN7 331 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 RUBCNQ92622 972 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 HPDLQ96IR7 371 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 FNBP1Q96RU3 617 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 HINFPQ9BQA5 517 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 SLC46A2Q9BY10 475 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 CHRDQ9H2X0 955 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 TMLHEQ9NVH6 421 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 UXTQ9UBK9 157 aaPredicted RBP13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 GTF3C4Q9UKN8 822 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 PCDHA7Q9UN72 937 aa13.32□□□□□ -0.28
CAPRIN1-213ENST00000533562 COL4A3Q01955 1670 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 PVALEFA0A1B0GWK0 134 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 MYBPHLA2RUH7 354 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 SLC38A8A6NNN8 435 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 GABRDO14764 452 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 F11P03951 625 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 CHRNB1P11230 501 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 HMGA1P17096 107 aaKnown RBP13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 TNNI1P19237 187 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 ACAT1P24752 427 aaKnown RBP13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 CYP2F1P24903 491 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 CCR3P51677 355 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 NLRP12P59046 1061 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 MAPRE1Q15691 268 aaKnown RBP13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 SNRNP35Q16560 246 aaKnown RBP13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 DDR2Q16832 855 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 SOWAHAQ2M3V2 549 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 CFAP221Q4G0U5 840 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 LMBRD2Q68DH5 695 aaPredicted RBP13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 C4orf50Q6ZRC1 276 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 SPATA2LQ8IUW3 424 aaPredicted RBP13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 CEP57L1Q8IYX8 460 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 MAB21L3Q8N8X9 362 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 XXYLT1Q8NBI6 393 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 ZBTB44Q8NCP5 570 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 OR5B17Q8NGF7 314 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 MRPS31Q92665 395 aaKnown RBP13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 FUBP3Q96I24 572 aaKnown RBP eCLIP13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 LRRC3BQ96PB8 259 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 PRMT8Q9NR22 394 aaPredicted RBP13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 AGPAT3Q9NRZ7 376 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 CGNQ9P2M7 1197 aaKnown RBP13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 MAGED2Q9UNF1 606 aaPredicted RBP13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 NCANO14594 1321 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 UBE4BO95155 1302 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 DCHS1Q96JQ0 3298 aa13.31□□□□□ -0.28
CAPRIN1-213ENST00000533562 FANCMQ8IYD8 2048 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 CEP250Q9BV73 2442 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 TSC2P49815 1807 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 SPECC1L-ADORA2AF8WAN1 911 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 TGFB1I1O43294 461 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 PRAMEF12O95522 483 aa13.3□□□□□ -0.28
CAPRIN1-213ENST00000533562 DLATP10515 647 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms