RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 PI4K2AQ9BTU6 479 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 WNT16Q9UBV4 365 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 HOOK1Q9UJC3 728 aaKnown RBP20.33■□□□□ 0.85
UBXN1-211ENST00000531056 GTF3C4Q9UKN8 822 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 CDH9Q9ULB4 789 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 DENND4CQ5VZ89 1909 aa20.33■□□□□ 0.84
UBXN1-211ENST00000531056 A0A1W2PRU2 124 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 MYBPHLA2RUH7 354 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 IKBKBO14920 756 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 KINO60870 393 aaKnown RBP20.32■□□□□ 0.84
UBXN1-211ENST00000531056 ATP2C2O75185 946 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 FAM163BP0C2L3 166 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 RPL13P26373 211 aaKnown RBP20.32■□□□□ 0.84
UBXN1-211ENST00000531056 GPR15P49685 360 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 VAMP7P51809 220 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 MCCD1P59942 119 aaPredicted RBP20.32■□□□□ 0.84
UBXN1-211ENST00000531056 PSMC1P62191 440 aaKnown RBP20.32■□□□□ 0.84
UBXN1-211ENST00000531056 ENPEPQ07075 957 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 ADAM9Q13443 819 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 NCOA4Q13772 614 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 VEPH1Q14D04 833 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 CFAP221Q4G0U5 840 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 FAM78AQ5JUQ0 283 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 INTS8Q75QN2 995 aaKnown RBP20.32■□□□□ 0.84
UBXN1-211ENST00000531056 FAM186BQ8IYM0 893 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 GPR152Q8TDT2 470 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 IPO9Q96P70 1041 aaKnown RBP20.32■□□□□ 0.84
UBXN1-211ENST00000531056 PLA2G2FQ9BZM2 168 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 CRTAC1Q9NQ79 661 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 FBXL21Q9UKT6 434 aa20.32■□□□□ 0.84
UBXN1-211ENST00000531056 COL4A2P08572 1712 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 KRBA1A5PL33 1030 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 FGF19O95750 216 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 NPR3P17342 541 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 CYP2F1P24903 491 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 PSMC2P35998 433 aaKnown RBP20.31■□□□□ 0.84
UBXN1-211ENST00000531056 ZNF699Q32M78 642 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 CWF19L1Q69YN2 538 aaKnown RBP20.31■□□□□ 0.84
UBXN1-211ENST00000531056 TANGO2Q6ICL3 276 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 SV2AQ7L0J3 742 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 SIX5Q8N196 739 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 FAM200AQ8TCP9 573 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 GIPC2Q8TF65 315 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 ELSPBP1Q96BH3 223 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 FUBP3Q96I24 572 aaKnown RBP eCLIP20.31■□□□□ 0.84
UBXN1-211ENST00000531056 MKNK1Q9BUB5 465 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 IL21Q9HBE4 155 aa20.31■□□□□ 0.84
UBXN1-211ENST00000531056 NXF1Q9UBU9 619 aaKnown RBP20.31■□□□□ 0.84
UBXN1-211ENST00000531056 GREB1Q4ZG55 1949 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 TRIM49P0CI25 452 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 TRIM49CP0CI26 452 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 HMGA1P17096 107 aaKnown RBP20.3■□□□□ 0.84
UBXN1-211ENST00000531056 GABRR2P28476 465 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 GPC5P78333 572 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 STXBP5Q5T5C0 1151 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 SPATA2LQ8IUW3 424 aaPredicted RBP20.3■□□□□ 0.84
UBXN1-211ENST00000531056 ZC3H3Q8IXZ2 948 aaKnown RBP20.3■□□□□ 0.84
UBXN1-211ENST00000531056 ADSSL1Q8N142 457 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 SMARCD2Q92925 531 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 MYLPFQ96A32 169 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 ELMO3Q96BJ8 720 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 GTPBP4Q9BZE4 634 aaKnown RBP20.3■□□□□ 0.84
UBXN1-211ENST00000531056 GPR88Q9GZN0 384 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 KCNH6Q9H252 994 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 SNX25Q9H3E2 840 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 SMYD3Q9H7B4 428 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 TRPV4Q9HBA0 871 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 MAN1B1Q9UKM7 699 aa20.3■□□□□ 0.84
UBXN1-211ENST00000531056 NCANO14594 1321 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 PDGFRBP09619 1106 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 AVPR2P30518 371 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 GNL1P36915 607 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-211ENST00000531056 MAGEA11P43364 429 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 PMS1P54277 932 aaKnown RBP20.29■□□□□ 0.84
UBXN1-211ENST00000531056 PPP3CAQ08209 521 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 ZNF667Q5HYK9 610 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 SDHAF4Q5VUM1 108 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 C4orf50Q6ZRC1 276 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 STKLD1Q8NE28 680 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 OR6B3Q8NGW1 331 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 ZSCAN18Q8TBC5 510 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-211ENST00000531056 MFSD1Q9H3U5 465 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 ZFP14Q9HCL3 533 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 CA14Q9ULX7 337 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 ZDBF2Q9HCK1 2354 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 COL4A3Q01955 1670 aa20.29■□□□□ 0.84
UBXN1-211ENST00000531056 ASS1P00966 412 aaKnown RBP20.28■□□□□ 0.84
UBXN1-211ENST00000531056 HLA-DRAP01903 254 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 KRT13P13646 458 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 CDC25CP30307 473 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 PIK3CAP42336 1068 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 RPL10AP62906 217 aaKnown RBP20.28■□□□□ 0.84
UBXN1-211ENST00000531056 MAPRE1Q15691 268 aaKnown RBP20.28■□□□□ 0.84
UBXN1-211ENST00000531056 DDR2Q16832 855 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 SGSM1Q2NKQ1 1148 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 IER5LQ5T953 404 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 ASTLQ6HA08 431 aaPredicted RBP20.28■□□□□ 0.84
UBXN1-211ENST00000531056 TMEM150AQ86TG1 271 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 TMEM105Q8N8V8 129 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 MYCBPAPQ8TBZ2 947 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms