RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 VRTNQ9H8Y1 702 aa20.5■□□□□ 0.87
FBXO28-205ENST00000523990 ABCB6Q9NP58 842 aa20.5■□□□□ 0.87
FBXO28-205ENST00000523990 GTF3C4Q9UKN8 822 aa20.5■□□□□ 0.87
FBXO28-205ENST00000523990 CA14Q9ULX7 337 aa20.5■□□□□ 0.87
FBXO28-205ENST00000523990 TACC1O75410 805 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 NPR3P17342 541 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 LMO2P25791 158 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 TNNC1P63316 161 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 GPC5P78333 572 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 BIRC3Q13489 604 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 WDR72Q3MJ13 1102 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 TANGO2Q6ICL3 276 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 FAM171BQ6P995 826 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 FAM200AQ8TCP9 573 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 TMC2Q8TDI7 906 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 ERCC4Q92889 916 aaPredicted RBP20.49■□□□□ 0.87
FBXO28-205ENST00000523990 SYAP1Q96A49 352 aaPredicted RBP20.49■□□□□ 0.87
FBXO28-205ENST00000523990 GSDMAQ96QA5 445 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 SYT15Q9BQS2 421 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 MRPL45Q9BRJ2 306 aaKnown RBP20.49■□□□□ 0.87
FBXO28-205ENST00000523990 PLA2G2FQ9BZM2 168 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 NME7Q9Y5B8 376 aa20.49■□□□□ 0.87
FBXO28-205ENST00000523990 MYBPHLA2RUH7 354 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 PHACTR2O75167 634 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 AKAP3O75969 853 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 VNN1O95497 513 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 GABRR2P28476 465 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 PSMC1P62191 440 aaKnown RBP20.48■□□□□ 0.87
FBXO28-205ENST00000523990 NCOA4Q13772 614 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 ZACNQ401N2 412 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 CFAP221Q4G0U5 840 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 COBLL1Q53SF7 1204 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 C1orf220Q5T0J3 134 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 STXBP5Q5T5C0 1151 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 ZNF658Q5TYW1 1059 aaPredicted RBP20.48■□□□□ 0.87
FBXO28-205ENST00000523990 ASTLQ6HA08 431 aaPredicted RBP20.48■□□□□ 0.87
FBXO28-205ENST00000523990 TMEM105Q8N8V8 129 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 GIPC2Q8TF65 315 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 SMARCD2Q92925 531 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 FUBP3Q96I24 572 aaKnown RBP eCLIP20.48■□□□□ 0.87
FBXO28-205ENST00000523990 IL21Q9HBE4 155 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 ARHGEF3Q9NR81 526 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 CDH9Q9ULB4 789 aa20.48■□□□□ 0.87
FBXO28-205ENST00000523990 ATP2C2O75185 946 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 GADD45BO75293 160 aaPredicted RBP20.47■□□□□ 0.87
FBXO28-205ENST00000523990 FGF19O95750 216 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 CYP2F1P24903 491 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 GPR15P49685 360 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 CLCN5P51795 746 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 ZNF699Q32M78 642 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 EDRF1Q3B7T1 1238 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 FLCNQ8NFG4 579 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 ZSCAN18Q8TBC5 510 aaPredicted RBP20.47■□□□□ 0.87
FBXO28-205ENST00000523990 SMARCE1Q969G3 411 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 MKNK1Q9BUB5 465 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 GPR88Q9GZN0 384 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 SLITRK6Q9H5Y7 841 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 TRPV4Q9HBA0 871 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 ZFP14Q9HCL3 533 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 CRTAC1Q9NQ79 661 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 HOOK1Q9UJC3 728 aaKnown RBP20.47■□□□□ 0.87
FBXO28-205ENST00000523990 PCDHA5Q9Y5H7 936 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 HELZP42694 1942 aaKnown RBP20.47■□□□□ 0.87
FBXO28-205ENST00000523990 NCANO14594 1321 aa20.47■□□□□ 0.87
FBXO28-205ENST00000523990 IKBKBO14920 756 aa20.46■□□□□ 0.87
FBXO28-205ENST00000523990 SMC2O95347 1197 aa20.46■□□□□ 0.87
FBXO28-205ENST00000523990 RPL13P26373 211 aaKnown RBP20.46■□□□□ 0.87
FBXO28-205ENST00000523990 PLA2G5P39877 138 aa20.46■□□□□ 0.87
FBXO28-205ENST00000523990 PRCPP42785 496 aa20.46■□□□□ 0.87
FBXO28-205ENST00000523990 INTS8Q75QN2 995 aaKnown RBP20.46■□□□□ 0.87
FBXO28-205ENST00000523990 SPATA2LQ8IUW3 424 aaPredicted RBP20.46■□□□□ 0.87
FBXO28-205ENST00000523990 ELOA2Q8IYF1 753 aaPredicted RBP20.46■□□□□ 0.87
FBXO28-205ENST00000523990 FAM186BQ8IYM0 893 aa20.46■□□□□ 0.87
FBXO28-205ENST00000523990 STKLD1Q8NE28 680 aa20.46■□□□□ 0.87
FBXO28-205ENST00000523990 PRSS33Q8NF86 280 aa20.46■□□□□ 0.87
FBXO28-205ENST00000523990 MYLPFQ96A32 169 aa20.46■□□□□ 0.87
FBXO28-205ENST00000523990 ATXN3LQ9H3M9 355 aa20.46■□□□□ 0.87
FBXO28-205ENST00000523990 NXF1Q9UBU9 619 aaKnown RBP20.46■□□□□ 0.87
FBXO28-205ENST00000523990 MYH10P35580 1976 aa20.46■□□□□ 0.87
FBXO28-205ENST00000523990 KINO60870 393 aaKnown RBP20.45■□□□□ 0.86
FBXO28-205ENST00000523990 PDGFRBP09619 1106 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 FAM163BP0C2L3 166 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 HMGA1P17096 107 aaKnown RBP20.45■□□□□ 0.86
FBXO28-205ENST00000523990 AOC1P19801 751 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 VAMP7P51809 220 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 ENPEPQ07075 957 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 ADAM9Q13443 819 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 VITQ6UXI7 678 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 C4orf50Q6ZRC1 276 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 SV2AQ7L0J3 742 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 PRRX2Q99811 253 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 SNX25Q9H3E2 840 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 SMYD3Q9H7B4 428 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 PATJQ8NI35 1801 aa20.45■□□□□ 0.86
FBXO28-205ENST00000523990 TRIM49P0CI25 452 aa20.44■□□□□ 0.86
FBXO28-205ENST00000523990 TRIM49CP0CI26 452 aa20.44■□□□□ 0.86
FBXO28-205ENST00000523990 CDC25CP30307 473 aa20.44■□□□□ 0.86
FBXO28-205ENST00000523990 PSMC2P35998 433 aaKnown RBP20.44■□□□□ 0.86
FBXO28-205ENST00000523990 GNL1P36915 607 aaPredicted RBP20.44■□□□□ 0.86
FBXO28-205ENST00000523990 MAGEA11P43364 429 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms