RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 ARID3BQ8IVW6 561 aaPredicted RBP20.06■□□□□ 0.8
SPIDR-220ENST00000522900 C12orf56Q8IXR9 622 aa20.06■□□□□ 0.8
SPIDR-220ENST00000522900 LRRC3BQ96PB8 259 aa20.06■□□□□ 0.8
SPIDR-220ENST00000522900 CGRRF1Q99675 332 aa20.06■□□□□ 0.8
SPIDR-220ENST00000522900 GOLPH3LQ9H4A5 285 aa20.06■□□□□ 0.8
SPIDR-220ENST00000522900 USP25Q9UHP3 1055 aa20.06■□□□□ 0.8
SPIDR-220ENST00000522900 R3HCC1Q9Y3T6 440 aaKnown RBP20.06■□□□□ 0.8
SPIDR-220ENST00000522900 MYBPHLA2RUH7 354 aa20.05■□□□□ 0.8
SPIDR-220ENST00000522900 EXOC3O60645 756 aa20.05■□□□□ 0.8
SPIDR-220ENST00000522900 HMGA1P17096 107 aaKnown RBP20.05■□□□□ 0.8
SPIDR-220ENST00000522900 LHX1P48742 406 aa20.05■□□□□ 0.8
SPIDR-220ENST00000522900 CASP4P49662 377 aa20.05■□□□□ 0.8
SPIDR-220ENST00000522900 PSMD2Q13200 908 aa20.05■□□□□ 0.8
SPIDR-220ENST00000522900 UBXN2BQ14CS0 331 aa20.05■□□□□ 0.8
SPIDR-220ENST00000522900 NFE2Q16621 373 aaPredicted RBP20.05■□□□□ 0.8
SPIDR-220ENST00000522900 DDR2Q16832 855 aa20.05■□□□□ 0.8
SPIDR-220ENST00000522900 MFSD6LQ8IWD5 586 aa20.05■□□□□ 0.8
SPIDR-220ENST00000522900 FSIP1Q8NA03 581 aa20.05■□□□□ 0.8
SPIDR-220ENST00000522900 FNBP1Q96RU3 617 aa20.05■□□□□ 0.8
SPIDR-220ENST00000522900 KCTD10Q9H3F6 313 aa20.05■□□□□ 0.8
SPIDR-220ENST00000522900 LTB4R2Q9NPC1 389 aa20.05■□□□□ 0.8
SPIDR-220ENST00000522900 CGNQ9P2M7 1197 aaKnown RBP20.05■□□□□ 0.8
SPIDR-220ENST00000522900 FGF19O95750 216 aa20.04■□□□□ 0.8
SPIDR-220ENST00000522900 RPN1P04843 607 aaKnown RBP20.04■□□□□ 0.8
SPIDR-220ENST00000522900 DPH6Q7L8W6 267 aa20.04■□□□□ 0.8
SPIDR-220ENST00000522900 TMEM150AQ86TG1 271 aa20.04■□□□□ 0.8
SPIDR-220ENST00000522900 MMS19Q96T76 1030 aa20.04■□□□□ 0.8
SPIDR-220ENST00000522900 SCAND2PQ9GZW5 306 aaPredicted RBP20.04■□□□□ 0.8
SPIDR-220ENST00000522900 DMAC2Q9NW81 257 aa20.04■□□□□ 0.8
SPIDR-220ENST00000522900 ATP6V1DQ9Y5K8 247 aa20.04■□□□□ 0.8
SPIDR-220ENST00000522900 A0A1W2PQ27 194 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 A0A1W2PQ64 194 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 A0A1W2PQD8 194 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 PDGFRBP09619 1106 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 TARSP26639 723 aaKnown RBP20.03■□□□□ 0.8
SPIDR-220ENST00000522900 NBL1P41271 181 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 PSMC1P62191 440 aaKnown RBP20.03■□□□□ 0.8
SPIDR-220ENST00000522900 TAF12Q16514 161 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 FAM171BQ6P995 826 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 FRMD5Q7Z6J6 570 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 SPATA18Q8TC71 538 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 DEPDC1BQ8WUY9 529 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 DNASE1L2Q92874 299 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 MRPL45Q9BRJ2 306 aaKnown RBP20.03■□□□□ 0.8
SPIDR-220ENST00000522900 SLC46A2Q9BY10 475 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 SMG9Q9H0W8 520 aaKnown RBP20.03■□□□□ 0.8
SPIDR-220ENST00000522900 TASP1Q9H6P5 420 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 NME7Q9Y5B8 376 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 TCHHQ07283 1943 aa20.03■□□□□ 0.8
SPIDR-220ENST00000522900 PROB1E7EW31 1015 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 ARNTLO00327 626 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 ZNF263O14978 683 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 PRAMEF12O95522 483 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 F11P03951 625 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 PCSK1P29120 753 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 NLRP12P59046 1061 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 MYL6P60660 151 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 DPYDQ12882 1025 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 FZD5Q13467 585 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 ARHGAP15Q53QZ3 475 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 ZNF852Q6ZMS4 543 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 KRBA2Q6ZNG9 492 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 GOLGA5Q8TBA6 731 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 IRF7Q92985 503 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 ELMO3Q96BJ8 720 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 SYT15Q9BQS2 421 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 ABCB6Q9NP58 842 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 CRTAC1Q9NQ79 661 aa20.02■□□□□ 0.8
SPIDR-220ENST00000522900 MAGED2Q9UNF1 606 aaPredicted RBP20.02■□□□□ 0.8
SPIDR-220ENST00000522900 LRRIQ3A6PVS8 624 aaPredicted RBP20.01■□□□□ 0.79
SPIDR-220ENST00000522900 ZNF202O95125 648 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 MYL1P05976 194 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 WARSP23381 471 aaKnown RBP20.01■□□□□ 0.79
SPIDR-220ENST00000522900 CDC25CP30307 473 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 DLG4P78352 724 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 WDR72Q3MJ13 1102 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 ASCL5Q7RTU5 278 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 SPATA2LQ8IUW3 424 aaPredicted RBP20.01■□□□□ 0.79
SPIDR-220ENST00000522900 SLC9A9Q8IVB4 645 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 C1orf210Q8IVY1 113 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 MAML2Q8IZL2 1156 aaPredicted RBP20.01■□□□□ 0.79
SPIDR-220ENST00000522900 PARD3BQ8TEW8 1205 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 E2F7Q96AV8 911 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 ZFYVE19Q96K21 471 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 OSBPL6Q9BZF3 934 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 TRPV5Q9NQA5 729 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 CDH9Q9ULB4 789 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 MAPK8IP1Q9UQF2 711 aa20.01■□□□□ 0.79
SPIDR-220ENST00000522900 PIEZO1Q92508 2521 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 SLC38A8A6NNN8 435 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 PDXKO00764 312 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 GFRA3O60609 400 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 NR3C1P04150 777 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 CSH1P0DML2 217 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 CSH2P0DML3 217 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 GNL1P36915 607 aaPredicted RBP20■□□□□ 0.79
SPIDR-220ENST00000522900 RPL10AP62906 217 aaKnown RBP20■□□□□ 0.79
SPIDR-220ENST00000522900 FCHO2Q0JRZ9 810 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 TRPC3Q13507 836 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 CFAP221Q4G0U5 840 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms