RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 C2orf15Q8WU43 125 aaKnown RBP6.97□□□□□ -1.29
KDM3B-208ENST00000512928 SMARCD2Q92925 531 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 PSMG2Q969U7 264 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 BORCS6Q96GS4 357 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 ZSWIM3Q96MP5 696 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 PRRX2Q99811 253 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 ACBD6Q9BR61 282 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 PLA2G2FQ9BZM2 168 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 DNAJC25Q9H1X3 360 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 BRD9Q9H8M2 597 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 ZNF334Q9HCZ1 680 aaPredicted RBP6.97□□□□□ -1.29
KDM3B-208ENST00000512928 RTN4Q9NQC3 1192 aaKnown RBP6.97□□□□□ -1.29
KDM3B-208ENST00000512928 AVENQ9NQS1 362 aaPredicted RBP6.97□□□□□ -1.29
KDM3B-208ENST00000512928 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.97□□□□□ -1.29
KDM3B-208ENST00000512928 SLC2A4RGQ9NR83 387 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 TMLHEQ9NVH6 421 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 GDAP2Q9NXN4 497 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 HOOK1Q9UJC3 728 aaKnown RBP6.97□□□□□ -1.29
KDM3B-208ENST00000512928 GTF3C4Q9UKN8 822 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 ASB3Q9Y575 518 aa6.97□□□□□ -1.29
KDM3B-208ENST00000512928 SCN1AP35498 2009 aa6.96□□□□□ -1.29
KDM3B-208ENST00000512928 MYBPHLA2RUH7 354 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 LRRIQ3A6PVS8 624 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 PDXKO00764 312 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 GALR2O43603 387 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 PI15O43692 258 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 ATP2C2O75185 946 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 MICAL2O94851 1124 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 RHOBTB3O94955 611 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 SMC2O95347 1197 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 FGF19O95750 216 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 CST3P01034 146 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 DCNP07585 359 aaKnown RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 KRT13P13646 458 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 NPR3P17342 541 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 AOC1P19801 751 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 CD72P21854 359 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 CYP2F1P24903 491 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 LMO2P25791 158 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 ANXA13P27216 316 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 CDC25CP30307 473 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 GNL1P36915 607 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 GRIK1P39086 918 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 PIK3CAP42336 1068 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 RAP1GAPP47736 663 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 CLCN5P51795 746 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 EPHA5P54756 1037 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 RPL10AP62906 217 aaKnown RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 DLG4P78352 724 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 NCOA4Q13772 614 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 UBXN2BQ14CS0 331 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 MLF2Q15773 248 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 SLC44A4Q53GD3 710 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 MDH1BQ5I0G3 518 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 TDRD10Q5VZ19 366 aaKnown RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 C4orf50Q6ZRC1 276 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 TPRG1Q6ZUI0 275 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 TMC8Q8IU68 726 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 C12orf56Q8IXR9 622 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 ELOA2Q8IYF1 753 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 SMYD4Q8IYR2 804 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 FMR1NBQ8N0W7 255 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 CXorf38Q8TB03 319 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 ATOH1Q92858 354 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 ERCC4Q92889 916 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 MYLPFQ96A32 169 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 SYAP1Q96A49 352 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 ELSPBP1Q96BH3 223 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 ELMO3Q96BJ8 720 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 SHDQ96IW2 340 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 ASB16Q96NS5 453 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 SYT15Q9BQS2 421 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 MRPL45Q9BRJ2 306 aaKnown RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 TRMT61BQ9BVS5 477 aaKnown RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 FOXQ1Q9C009 403 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 GPR88Q9GZN0 384 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 SMG9Q9H0W8 520 aaKnown RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 KCNH6Q9H252 994 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 KCTD10Q9H3F6 313 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 TRPC7Q9HCX4 862 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 HEBP1Q9NRV9 189 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 RMND1Q9NWS8 449 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 HSFX1Q9UBD0 423 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 MAGEC2Q9UBF1 373 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-208ENST00000512928 SIT1Q9Y3P8 196 aa6.96□□□□□ -1.3
KDM3B-208ENST00000512928 HEPACAM2A8MVW5 462 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 A8MXQ7 604 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 ZNF263O14978 683 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 KINO60870 393 aaKnown RBP6.95□□□□□ -1.3
KDM3B-208ENST00000512928 MOSPD3O75425 235 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 TRIM49P0CI25 452 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 TRIM49CP0CI26 452 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 P4HA1P13674 534 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 PSMC3P17980 439 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 WARSP23381 471 aaKnown RBP6.95□□□□□ -1.3
KDM3B-208ENST00000512928 BDNFP23560 247 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 FCARP24071 287 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 RPL13P26373 211 aaKnown RBP6.95□□□□□ -1.3
KDM3B-208ENST00000512928 ATICP31939 592 aa6.95□□□□□ -1.3
KDM3B-208ENST00000512928 AVPR1AP37288 418 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms