RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PATJQ8NI35 1801 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 A0A1B0GTH6 734 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 WDR27A2RRH5 827 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 A8MXQ7 604 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 PPEF2O14830 753 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 TGM5O43548 720 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 CSH1P0DML2 217 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 CSH2P0DML3 217 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 VDRP11473 427 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 PTPN1P18031 435 aaKnown RBP9.01□□□□□ -0.97
PDGFC-205ENST00000506880 DDX6P26196 483 aaKnown RBP eCLIP9.01□□□□□ -0.97
PDGFC-205ENST00000506880 PON1P27169 355 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 IRS1P35568 1242 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 ALDH1A3P47895 512 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 GUCY2FP51841 1108 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 COPB1P53618 953 aaKnown RBP9.01□□□□□ -0.97
PDGFC-205ENST00000506880 EPHB3P54753 998 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 EPHA5P54756 1037 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 ATAT1Q5SQI0 421 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 LMBRD2Q68DH5 695 aaPredicted RBP9.01□□□□□ -0.97
PDGFC-205ENST00000506880 ARHGAP17Q68EM7 881 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 SARM1Q6SZW1 724 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 TAS1R1Q7RTX1 841 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 GPR149Q86SP6 731 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 SCML4Q8N228 414 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 ZNF276Q8N554 614 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 OR6B3Q8NGW1 331 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 HASPINQ8TF76 798 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 SHC3Q92529 594 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 TRMT2BQ96GJ1 504 aaKnown RBP9.01□□□□□ -0.97
PDGFC-205ENST00000506880 SMARCD1Q96GM5 515 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 C8orf48Q96LL4 319 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 MYRFLQ96LU7 910 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 HNRNPABQ99729 332 aaKnown RBP9.01□□□□□ -0.97
PDGFC-205ENST00000506880 TRIM62Q9BVG3 475 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 STK33Q9BYT3 514 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 PRKD2Q9BZL6 878 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 INTS2Q9H0H0 1204 aaKnown RBP9.01□□□□□ -0.97
PDGFC-205ENST00000506880 HSD3B7Q9H2F3 369 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 CBX8Q9HC52 389 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 CSNK1G1Q9HCP0 422 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 RTN4Q9NQC3 1192 aaKnown RBP9.01□□□□□ -0.97
PDGFC-205ENST00000506880 CISHQ9NSE2 258 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.01□□□□□ -0.97
PDGFC-205ENST00000506880 NXF1Q9UBU9 619 aaKnown RBP9.01□□□□□ -0.97
PDGFC-205ENST00000506880 CD207Q9UJ71 328 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 ITIH6Q6UXX5 1313 aa9.01□□□□□ -0.97
PDGFC-205ENST00000506880 DOCK8Q8NF50 2099 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 A0A1W2PQJ5 194 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 MTMR11A4FU01 709 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 PRRG1O14668 218 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 RTN3O95197 1032 aaPredicted RBP9□□□□□ -0.97
PDGFC-205ENST00000506880 LRG1P02750 347 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 SETSIPP0DME0 302 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 HAPLN1P10915 354 aaPredicted RBP9□□□□□ -0.97
PDGFC-205ENST00000506880 ANXA13P27216 316 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 PSEN1P49768 467 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 ZNF132P52740 706 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 MRPS5P82675 430 aaKnown RBP9□□□□□ -0.97
PDGFC-205ENST00000506880 PPM1LQ5SGD2 360 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 IQCEQ6IPM2 695 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 Q7L0L9 218 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 APTXQ7Z2E3 356 aaKnown RBP9□□□□□ -0.97
PDGFC-205ENST00000506880 SPATA2LQ8IUW3 424 aaPredicted RBP9□□□□□ -0.97
PDGFC-205ENST00000506880 PLCD3Q8N3E9 789 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 PPM1KQ8N3J5 372 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 UBR7Q8N806 425 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 PDZD8Q8NEN9 1154 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 STK32AQ8WU08 396 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 SUSD6Q92537 303 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 SYN2Q92777 582 aaPredicted RBP9□□□□□ -0.97
PDGFC-205ENST00000506880 SEMA4DQ92854 862 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 PSMG2Q969U7 264 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 E2F7Q96AV8 911 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 EEF2KMTQ96G04 330 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 TMEM176AQ96HP8 235 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 CDK5RAP1Q96SZ6 601 aaKnown RBP9□□□□□ -0.97
PDGFC-205ENST00000506880 RTP3Q9BQQ7 232 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 ZNF518BQ9C0D4 1074 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 FBXO44Q9H4M3 255 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 APOBEC3GQ9HC16 384 aaKnown RBP9□□□□□ -0.97
PDGFC-205ENST00000506880 MAN1C1Q9NR34 630 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 NR2E1Q9Y466 385 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9□□□□□ -0.97
PDGFC-205ENST00000506880 INSL5Q9Y5Q6 135 aa9□□□□□ -0.97
PDGFC-205ENST00000506880 C2orf16Q68DN1 1984 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 F8W810 466 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 C2CD2LO14523 706 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 SART1O43290 800 aaKnown RBP8.99□□□□□ -0.97
PDGFC-205ENST00000506880 GLP2RO95838 553 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 SERPINC1P01008 464 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 C8AP07357 584 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 UCHL3P15374 230 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 PTPN2P17706 415 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 CDC25CP30307 473 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 TUBP50607 506 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 NDST1P52848 882 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 BCAT1P54687 386 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 UBXN1Q04323 297 aa8.99□□□□□ -0.97
PDGFC-205ENST00000506880 PTK2Q05397 1052 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms