RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CTTNBP2NLQ9P2B4 639 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 LRCH1Q9Y2L9 728 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 MAP3K2Q9Y2U5 619 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 RAD54BQ9Y620 910 aa7.14□□□□□ -1.27
HERC4-213ENST00000506515 A0A1W2PPC4 97 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 IFRD1O00458 451 aaPredicted RBP7.13□□□□□ -1.27
HERC4-213ENST00000506515 DCLK1O15075 740 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 MUSKO15146 869 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 THAP12O43422 761 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 EIF3JO75822 258 aaKnown RBP7.13□□□□□ -1.27
HERC4-213ENST00000506515 NCR1O76036 304 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 KCNA2P16389 499 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 PPM1AP35813 382 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 VIPR2P41587 438 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 TRAPPC10P48553 1259 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 FAM189BP81408 668 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 MC2RQ01718 297 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 MYLK4Q86YV6 388 aaPredicted RBP7.13□□□□□ -1.27
HERC4-213ENST00000506515 SMC5Q8IY18 1101 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 CXorf38Q8TB03 319 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 POC1BQ8TC44 478 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 ZC3H10Q96K80 434 aaKnown RBP7.13□□□□□ -1.27
HERC4-213ENST00000506515 MOGAT1Q96PD6 335 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 CRB3Q9BUF7 120 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 ZSCAN32Q9NX65 697 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 SMPD4Q9NXE4 827 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 MYO1AQ9UBC5 1043 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 ZNF212Q9UDV6 495 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 MID2Q9UJV3 735 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 FPGT-TNNI3KV9GXZ4 949 aa7.13□□□□□ -1.27
HERC4-213ENST00000506515 LOC102724159A0A0B4J2E5 919 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 SUN1O94901 812 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 TXNP10599 105 aaKnown RBP7.12□□□□□ -1.27
HERC4-213ENST00000506515 CYP2C9P11712 490 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 XRCC6P12956 609 aaKnown RBP eCLIP7.12□□□□□ -1.27
HERC4-213ENST00000506515 GCLCP48506 637 aaPredicted RBP7.12□□□□□ -1.27
HERC4-213ENST00000506515 LILRA4P59901 499 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 TOB2Q14106 344 aaPredicted RBP7.12□□□□□ -1.27
HERC4-213ENST00000506515 PWP2Q15269 919 aaKnown RBP7.12□□□□□ -1.27
HERC4-213ENST00000506515 SLC35G1Q2M3R5 365 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 GRAMD1BQ3KR37 738 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 PREPLQ4J6C6 727 aaPredicted RBP7.12□□□□□ -1.27
HERC4-213ENST00000506515 PLA1AQ53H76 456 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 FAM83BQ5T0W9 1011 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 LAYNQ6UX15 382 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 LRRC55Q6ZSA7 311 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 TMPRSS6Q8IU80 811 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 TMEM132CQ8N3T6 1108 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 ZNF566Q969W8 418 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 LRRC46Q96FV0 321 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 HEPHQ9BQS7 1158 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 SELENOOQ9BVL4 669 aa7.12□□□□□ -1.27
HERC4-213ENST00000506515 WDR12Q9GZL7 423 aaKnown RBP7.12□□□□□ -1.27
HERC4-213ENST00000506515 RAD54L2Q9Y4B4 1467 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 RAB27BO00194 218 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 ZFPL1O95159 310 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 CFIP05156 583 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 ATXN1LP0C7T5 689 aaKnown RBP7.11□□□□□ -1.27
HERC4-213ENST00000506515 IL6STP40189 918 aaPredicted RBP7.11□□□□□ -1.27
HERC4-213ENST00000506515 ZNF134P52741 427 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 WNT3P56703 355 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 KRT17Q04695 432 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 CD300EQ496F6 205 aaPredicted RBP7.11□□□□□ -1.27
HERC4-213ENST00000506515 B3GNTL1Q67FW5 361 aaPredicted RBP7.11□□□□□ -1.27
HERC4-213ENST00000506515 BEND5Q7L4P6 421 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 CLNKQ7Z7G1 428 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 ZNF280BQ86YH2 543 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 C1orf210Q8IVY1 113 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 YAF2Q8IY57 180 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 SYTL1Q8IYJ3 562 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 SDR16C5Q8N3Y7 309 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 TTC9BQ8N6N2 239 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 Q8NA96 180 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 IPCEF1Q8WWN9 437 aaPredicted RBP7.11□□□□□ -1.27
HERC4-213ENST00000506515 EXTL1Q92935 676 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 RNF31Q96EP0 1072 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 PPP1R9BQ96SB3 815 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 MESP1Q9BRJ9 268 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 PPCSQ9HAB8 311 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 AKIP1Q9NQ31 210 aa7.11□□□□□ -1.27
HERC4-213ENST00000506515 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.11□□□□□ -1.27
HERC4-213ENST00000506515 H7C4K7 107 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 RNASET2O00584 256 aaKnown RBP7.1□□□□□ -1.27
HERC4-213ENST00000506515 ITGALP20701 1170 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 EEF1GP26641 437 aaKnown RBP7.1□□□□□ -1.27
HERC4-213ENST00000506515 IL1R2P27930 398 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 TECP42680 631 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 HSPA7P48741 367 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 PXNP49023 591 aaPredicted RBP7.1□□□□□ -1.27
HERC4-213ENST00000506515 ANXA11P50995 505 aaKnown RBP7.1□□□□□ -1.27
HERC4-213ENST00000506515 CXADRP78310 365 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 SATB1Q01826 763 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 FPGSQ05932 587 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 TRIM14Q14142 442 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 SLC29A2Q14542 456 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 R3HDM1Q15032 1099 aaKnown RBP7.1□□□□□ -1.27
HERC4-213ENST00000506515 MPEG1Q2M385 716 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 SPDYE7PQ495Y7 208 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 USP39Q53GS9 565 aaKnown RBP7.1□□□□□ -1.27
HERC4-213ENST00000506515 TMEM108Q6UXF1 575 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms