RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 KAT6BQ8WYB5 2073 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 LOC102723971A0A1B0GUV8 181 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 HMX3A6NHT5 357 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 POLRMTO00411 1230 aaKnown RBP4.28□□□□□ -1.72
CALD1-224ENST00000498254 FCHO1O14526 889 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 DCLK1O15075 740 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 B4GALT3O60512 393 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 RASAL1O95294 804 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 ANXA1P04083 346 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 CENPBP07199 599 aaPredicted RBP4.28□□□□□ -1.72
CALD1-224ENST00000498254 C1QTNF9P0C862 333 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 IDEP14735 1019 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 CR2P20023 1033 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 ATICP31939 592 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 CPT1AP50416 773 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 COPAP53621 1224 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 LILRA4P59901 499 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 SLFN5Q08AF3 891 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 ARHGEF7Q14155 803 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 SIM2Q14190 667 aaPredicted RBP4.28□□□□□ -1.72
CALD1-224ENST00000498254 TMTC4Q5T4D3 741 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 BORAQ6PGQ7 559 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 KLHL17Q6TDP4 642 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 CLEC4GQ6UXB4 293 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 CYP26C1Q6V0L0 522 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 RFX8Q6ZV50 586 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 FAM83AQ86UY5 434 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 GATAD2AQ86YP4 633 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 CCDC28AQ8IWP9 274 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 TP53I13Q8NBR0 393 aaPredicted RBP4.28□□□□□ -1.72
CALD1-224ENST00000498254 DACT3Q96B18 629 aaPredicted RBP4.28□□□□□ -1.72
CALD1-224ENST00000498254 MARS2Q96GW9 593 aaKnown RBP4.28□□□□□ -1.72
CALD1-224ENST00000498254 GDF15Q99988 308 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 CNPPD1Q9BV87 410 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 PLA2G12BQ9BX93 195 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 EIF2AQ9BY44 585 aaKnown RBP4.28□□□□□ -1.72
CALD1-224ENST00000498254 ZSCAN32Q9NX65 697 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 GGA3Q9NZ52 723 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 IFT80Q9P2H3 777 aaPredicted RBP4.28□□□□□ -1.72
CALD1-224ENST00000498254 HESX1Q9UBX0 185 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 FBXO9Q9UK97 447 aaPredicted RBP4.28□□□□□ -1.72
CALD1-224ENST00000498254 CRYL1Q9Y2S2 319 aa4.28□□□□□ -1.72
CALD1-224ENST00000498254 AATKQ6ZMQ8 1374 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 PRRT4C9JH25 899 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 hCG_1984214I3L0E3 225 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 EPB41L2O43491 1005 aaKnown RBP4.27□□□□□ -1.73
CALD1-224ENST00000498254 PIAS2O75928 621 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 RHOBTB3O94955 611 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 CHEK2O96017 543 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 LMNAP02545 664 aaKnown RBP4.27□□□□□ -1.73
CALD1-224ENST00000498254 CKBP12277 381 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 CKMT1AP12532 417 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 FDXRP22570 491 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 ZNF134P52741 427 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 ARL4CP56559 192 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 LINC00310P59036 64 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 FOXD4Q12950 439 aaPredicted RBP4.27□□□□□ -1.73
CALD1-224ENST00000498254 G3BP1Q13283 466 aaKnown RBP eCLIP4.27□□□□□ -1.73
CALD1-224ENST00000498254 CNGB1Q14028 1251 aaPredicted RBP4.27□□□□□ -1.73
CALD1-224ENST00000498254 MAPRE1Q15691 268 aaKnown RBP4.27□□□□□ -1.73
CALD1-224ENST00000498254 ELAVL1Q15717 326 aaKnown RBP4.27□□□□□ -1.73
CALD1-224ENST00000498254 ZIK1Q3SY52 487 aaPredicted RBP4.27□□□□□ -1.73
CALD1-224ENST00000498254 ZNF385BQ569K4 471 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 ANKRD45Q5TZF3 282 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 PLAG1Q6DJT9 500 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 FCRL6Q6DN72 434 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 TAPT1Q6NXT6 567 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.27□□□□□ -1.73
CALD1-224ENST00000498254 PPP1R32Q7Z5V6 425 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 FAM124AQ86V42 546 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 MOGAT3Q86VF5 341 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 CFAP52Q8N1V2 620 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 OR1N1Q8NGS0 311 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 STT3BQ8TCJ2 826 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 TBATAQ96M53 351 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 GNRHR2Q96P88 292 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 TRIB1Q96RU8 372 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 LMF1Q96S06 567 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 NELL2Q99435 816 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 SMOQ99835 787 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 KATNAL1Q9BW62 490 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 SIK2Q9H0K1 926 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 SMOC2Q9H3U7 446 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 NECTIN3Q9NQS3 549 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 SMC4Q9NTJ3 1288 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 ETAA1Q9NY74 926 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 MRPS17Q9Y2R5 130 aaKnown RBP4.27□□□□□ -1.73
CALD1-224ENST00000498254 HS3ST4Q9Y661 456 aa4.27□□□□□ -1.73
CALD1-224ENST00000498254 A0A0B4J269 797 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 DRGXA6NNA5 263 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 B9A039 149 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 NPIPB6E9PJ23 425 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 J3KRW8 73 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 EYA2O00167 538 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 RGS10O43665 173 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 RRP9O43818 475 aaKnown RBP4.26□□□□□ -1.73
CALD1-224ENST00000498254 SRGAP2O75044 1071 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 INMTO95050 263 aa4.26□□□□□ -1.73
CALD1-224ENST00000498254 KRT1P04264 644 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms