RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 ZNF334Q9HCZ1 680 aaPredicted RBP19.1■□□□□ 0.65
ABCF3-217ENST00000489719 NXF1Q9UBU9 619 aaKnown RBP19.1■□□□□ 0.65
ABCF3-217ENST00000489719 CDH9Q9ULB4 789 aa19.1■□□□□ 0.65
ABCF3-217ENST00000489719 TRAF3IP3Q9Y228 551 aa19.1■□□□□ 0.65
ABCF3-217ENST00000489719 SIT1Q9Y3P8 196 aa19.1■□□□□ 0.65
ABCF3-217ENST00000489719 MYBPHLA2RUH7 354 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 NRG2O14511 850 aaPredicted RBP19.09■□□□□ 0.65
ABCF3-217ENST00000489719 DPYSL4O14531 572 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 CSH1P0DML2 217 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 CSH2P0DML3 217 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 PSMC3P17980 439 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 WARSP23381 471 aaKnown RBP19.09■□□□□ 0.65
ABCF3-217ENST00000489719 CYP2F1P24903 491 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 LMO2P25791 158 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 RPL13P26373 211 aaKnown RBP19.09■□□□□ 0.65
ABCF3-217ENST00000489719 VIPR2P41587 438 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 STARD6P59095 220 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 MYL6P60660 151 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 PRKCQQ04759 706 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 TCF15Q12870 199 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 MLF2Q15773 248 aaPredicted RBP19.09■□□□□ 0.65
ABCF3-217ENST00000489719 GPR158Q5T848 1215 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 C4orf50Q6ZRC1 276 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 ARID3BQ8IVW6 561 aaPredicted RBP19.09■□□□□ 0.65
ABCF3-217ENST00000489719 YAF2Q8IY57 180 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 FMR1NBQ8N0W7 255 aaPredicted RBP19.09■□□□□ 0.65
ABCF3-217ENST00000489719 GUF1Q8N442 669 aaKnown RBP19.09■□□□□ 0.65
ABCF3-217ENST00000489719 OR6B3Q8NGW1 331 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 ATOH1Q92858 354 aaPredicted RBP19.09■□□□□ 0.65
ABCF3-217ENST00000489719 IRF7Q92985 503 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 SYT15Q9BQS2 421 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 RMND1Q9NWS8 449 aa19.09■□□□□ 0.65
ABCF3-217ENST00000489719 MAGEC2Q9UBF1 373 aaPredicted RBP19.09■□□□□ 0.65
ABCF3-217ENST00000489719 HOOK1Q9UJC3 728 aaKnown RBP19.09■□□□□ 0.65
ABCF3-217ENST00000489719 LRRIQ3A6PVS8 624 aaPredicted RBP19.08■□□□□ 0.64
ABCF3-217ENST00000489719 HEPACAM2A8MVW5 462 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 ATP2C2O75185 946 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 TACC1O75410 805 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 STAU1O95793 577 aaKnown RBP19.08■□□□□ 0.64
ABCF3-217ENST00000489719 FCARP24071 287 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 CLDN10P78369 228 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 GRM2Q14416 872 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 DDR2Q16832 855 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 FAM171BQ6P995 826 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 MFSD6LQ8IWD5 586 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 PLEKHO2Q8TD55 490 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 TMC2Q8TDI7 906 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 DEPDC1BQ8WUY9 529 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 KBTBD7Q8WVZ9 684 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 FUBP3Q96I24 572 aaKnown RBP eCLIP19.08■□□□□ 0.64
ABCF3-217ENST00000489719 GZF1Q9H116 711 aaPredicted RBP19.08■□□□□ 0.64
ABCF3-217ENST00000489719 TASP1Q9H6P5 420 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 MAGED2Q9UNF1 606 aaPredicted RBP19.08■□□□□ 0.64
ABCF3-217ENST00000489719 SCN1AP35498 2009 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 DOCK6Q96HP0 2047 aa19.08■□□□□ 0.64
ABCF3-217ENST00000489719 KANSL1LA0AUZ9 987 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 H0Y858 1186 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 IKBKBO14920 756 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 ZNF263O14978 683 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 HCRTO43612 131 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 SMC2O95347 1197 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 C4BPAP04003 597 aaKnown RBP19.07■□□□□ 0.64
ABCF3-217ENST00000489719 NR2F2P24468 414 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 GDI1P31150 447 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 ADAM9Q13443 819 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 PNOCQ13519 176 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 NCOA4Q13772 614 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 CFAP221Q4G0U5 840 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 VITQ6UXI7 678 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 GPIHBP1Q8IV16 184 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 SCN4BQ8IWT1 228 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 DTWD2Q8NBA8 298 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 NELL2Q99435 816 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 PKMYT1Q99640 499 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 MRPL45Q9BRJ2 306 aaKnown RBP19.07■□□□□ 0.64
ABCF3-217ENST00000489719 ZMYM5Q9UJ78 669 aa19.07■□□□□ 0.64
ABCF3-217ENST00000489719 ZDBF2Q9HCK1 2354 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 DOCK8Q8NF50 2099 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 ANK1P16157 1881 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 MAPK13O15264 365 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 KRT13P13646 458 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 GPR15P49685 360 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 PSMC1P62191 440 aaKnown RBP19.06■□□□□ 0.64
ABCF3-217ENST00000489719 CYP27A1Q02318 531 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 FAM160A1Q05DH4 1040 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 NFIL3Q16649 462 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 SGSM1Q2NKQ1 1148 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 ZNF699Q32M78 642 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 ZNF667Q5HYK9 610 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 STXBP5Q5T5C0 1151 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 SDHAF4Q5VUM1 108 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 TDRD10Q5VZ19 366 aaKnown RBP19.06■□□□□ 0.64
ABCF3-217ENST00000489719 DNASE1L2Q92874 299 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 XYLT2Q9H1B5 865 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 IL21Q9HBE4 155 aa19.06■□□□□ 0.64
ABCF3-217ENST00000489719 UXTQ9UBK9 157 aaPredicted RBP19.06■□□□□ 0.64
ABCF3-217ENST00000489719 NOTCH4Q99466 2003 aa19.05■□□□□ 0.64
ABCF3-217ENST00000489719 FAM170BA6NMN3 283 aa19.05■□□□□ 0.64
ABCF3-217ENST00000489719 A8MXQ7 604 aa19.05■□□□□ 0.64
ABCF3-217ENST00000489719 DCNP07585 359 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms