RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 ATP5HO75947 161 aa20.72■□□□□ 0.91
LIMS2-215ENST00000484252 FARP2O94887 1054 aaPredicted RBP20.72■□□□□ 0.91
LIMS2-215ENST00000484252 KRT7P08729 469 aa20.72■□□□□ 0.91
LIMS2-215ENST00000484252 UBA1P22314 1058 aaKnown RBP20.72■□□□□ 0.91
LIMS2-215ENST00000484252 ALDH5A1P51649 535 aaPredicted RBP20.72■□□□□ 0.91
LIMS2-215ENST00000484252 PLCB3Q01970 1234 aa20.72■□□□□ 0.91
LIMS2-215ENST00000484252 ADCY1Q08828 1119 aa20.72■□□□□ 0.91
LIMS2-215ENST00000484252 PDK4Q16654 411 aa20.72■□□□□ 0.91
LIMS2-215ENST00000484252 CDCA2Q69YH5 1023 aaPredicted RBP20.72■□□□□ 0.91
LIMS2-215ENST00000484252 ECHDC2Q86YB7 292 aa20.72■□□□□ 0.91
LIMS2-215ENST00000484252 ZBED8Q8IZ13 594 aa20.72■□□□□ 0.91
LIMS2-215ENST00000484252 WDTC1Q8N5D0 677 aa20.72■□□□□ 0.91
LIMS2-215ENST00000484252 CEP120Q8N960 986 aa20.72■□□□□ 0.91
LIMS2-215ENST00000484252 PRPF31Q8WWY3 499 aaKnown RBP20.72■□□□□ 0.91
LIMS2-215ENST00000484252 N4BP2L2Q92802 583 aaPredicted RBP20.72■□□□□ 0.91
LIMS2-215ENST00000484252 ACO2Q99798 780 aaKnown RBP20.72■□□□□ 0.91
LIMS2-215ENST00000484252 PAIP2Q9BPZ3 127 aaKnown RBP20.72■□□□□ 0.91
LIMS2-215ENST00000484252 GAS2O43903 313 aaKnown RBP20.71■□□□□ 0.91
LIMS2-215ENST00000484252 MYCNP04198 464 aaPredicted RBP20.71■□□□□ 0.91
LIMS2-215ENST00000484252 PHBP35232 272 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 PDIA2Q13087 525 aaKnown RBP20.71■□□□□ 0.91
LIMS2-215ENST00000484252 FASTKD3Q14CZ7 662 aaKnown RBP20.71■□□□□ 0.91
LIMS2-215ENST00000484252 PKN2Q16513 984 aaKnown RBP20.71■□□□□ 0.91
LIMS2-215ENST00000484252 HADHQ16836 314 aaKnown RBP20.71■□□□□ 0.91
LIMS2-215ENST00000484252 TXNRD3NBQ6F5E7 133 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 ZBTB33Q86T24 672 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 APOBEC3FQ8IUX4 373 aaKnown RBP20.71■□□□□ 0.91
LIMS2-215ENST00000484252 ZBTB8OSQ8IWT0 167 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 FNIP1Q8TF40 1166 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 TMEM121Q9BTD3 319 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 LHX5Q9H2C1 402 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 TXLNGQ9NUQ3 528 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 CPSF3Q9UKF6 684 aaKnown RBP20.71■□□□□ 0.91
LIMS2-215ENST00000484252 PNMA3Q9UL41 463 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 AGTPBP1Q9UPW5 1226 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 FARP1Q9Y4F1 1045 aaPredicted RBP20.71■□□□□ 0.91
LIMS2-215ENST00000484252 C3orf70A6NLC5 250 aaPredicted RBP20.71■□□□□ 0.91
LIMS2-215ENST00000484252 SIGLEC16A6NMB1 481 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 SMAPO00193 183 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 MED7O43513 233 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 SPAG7O75391 227 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 MGAT5Q09328 741 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 SETDB1Q15047 1291 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 E2F5Q15329 346 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 HIF1AQ16665 826 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 DALRD3Q5D0E6 543 aaKnown RBP20.71■□□□□ 0.91
LIMS2-215ENST00000484252 EFHC2Q5JST6 749 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 PPIL6Q8IXY8 311 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 EXOC8Q8IYI6 725 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 PHTF1Q9UMS5 762 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.71■□□□□ 0.91
LIMS2-215ENST00000484252 USH1CQ9Y6N9 552 aa20.71■□□□□ 0.91
LIMS2-215ENST00000484252 PSMA2P25787 234 aa20.7■□□□□ 0.9
LIMS2-215ENST00000484252 YARSP54577 528 aaKnown RBP20.7■□□□□ 0.9
LIMS2-215ENST00000484252 ARL4CP56559 192 aa20.7■□□□□ 0.9
LIMS2-215ENST00000484252 GEMIN4P57678 1058 aaKnown RBP20.7■□□□□ 0.9
LIMS2-215ENST00000484252 CNTN2Q02246 1040 aa20.7■□□□□ 0.9
LIMS2-215ENST00000484252 MXD4Q14582 209 aaPredicted RBP20.7■□□□□ 0.9
LIMS2-215ENST00000484252 ZNF699Q32M78 642 aa20.7■□□□□ 0.9
LIMS2-215ENST00000484252 ZNF394Q53GI3 561 aa20.7■□□□□ 0.9
LIMS2-215ENST00000484252 ZC3H12AQ5D1E8 599 aaKnown RBP20.7■□□□□ 0.9
LIMS2-215ENST00000484252 SCARA3Q6AZY7 606 aa20.7■□□□□ 0.9
LIMS2-215ENST00000484252 THNSL1Q8IYQ7 743 aa20.7■□□□□ 0.9
LIMS2-215ENST00000484252 TFAP2BQ92481 460 aa20.7■□□□□ 0.9
LIMS2-215ENST00000484252 HAUS1Q96CS2 278 aa20.7■□□□□ 0.9
LIMS2-215ENST00000484252 C2orf40Q9H1Z8 148 aa20.7■□□□□ 0.9
LIMS2-215ENST00000484252 PPP1R12AO14974 1030 aaPredicted RBP20.69■□□□□ 0.9
LIMS2-215ENST00000484252 UNC5CO95185 931 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 IFNB1P01574 187 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 PRKCBP05771 671 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 SLC25A11Q02978 314 aaKnown RBP20.69■□□□□ 0.9
LIMS2-215ENST00000484252 TAZQ16635 292 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 MAPK6Q16659 721 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 NOL9Q5SY16 702 aaKnown RBP20.69■□□□□ 0.9
LIMS2-215ENST00000484252 FAM47EQ6ZV65 393 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 BBS12Q6ZW61 710 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 LRRC8CQ8TDW0 803 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 SLC16A10Q8TF71 515 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 SEPT1Q8WYJ6 367 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 RAB3IPQ96QF0 476 aaPredicted RBP20.69■□□□□ 0.9
LIMS2-215ENST00000484252 WDR35Q9P2L0 1181 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 RGS17Q9UGC6 210 aaPredicted RBP20.69■□□□□ 0.9
LIMS2-215ENST00000484252 SNCAIPQ9Y6H5 919 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 TTLL13PA6NNM8 815 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 ZWINTO95229 277 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 TNNC2P02585 160 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 TGFB3P10600 412 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 KRT3P12035 628 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 TSHRP16473 764 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 ASPAP45381 313 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 FSTL1Q12841 308 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 CYP4A22Q5TCH4 519 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 ATP11CQ8NB49 1132 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 ACSF2Q96CM8 615 aaPredicted RBP20.69■□□□□ 0.9
LIMS2-215ENST00000484252 EBF2Q9HAK2 575 aa20.69■□□□□ 0.9
LIMS2-215ENST00000484252 CCDC189A1A4V9 331 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 ABLIM1O14639 778 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 TYROBPO43914 113 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 EDF1O60869 148 aaKnown RBP20.68■□□□□ 0.9
LIMS2-215ENST00000484252 DCTN3O75935 186 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms