RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 KIAA0586Q9BVV6 1533 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 WRNQ14191 1432 aaPredicted RBP eCLIP4.67□□□□□ -1.66
GTF3A-207ENST00000482655 ADM5C9JUS6 153 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 PLIN1O60240 522 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 CAND2O75155 1236 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 RFPL1O75677 317 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 ABLIM3O94929 683 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 KRT18P05783 430 aaKnown RBP4.67□□□□□ -1.66
GTF3A-207ENST00000482655 HABP2Q14520 560 aaPredicted RBP4.67□□□□□ -1.66
GTF3A-207ENST00000482655 HLTFQ14527 1009 aaKnown RBP eCLIP4.67□□□□□ -1.66
GTF3A-207ENST00000482655 KIF22Q14807 665 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 MLC1Q15049 377 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 LRRC41Q15345 812 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 TXNRD1Q16881 649 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 GFOD2Q3B7J2 385 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 FAM153CQ494X1 144 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 TSTD2Q5T7W7 516 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 FAM102BQ5T8I3 360 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 NXNQ6DKJ4 435 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 CCSAPQ6IQ19 270 aaPredicted RBP4.67□□□□□ -1.66
GTF3A-207ENST00000482655 CXorf57Q6NSI4 855 aaKnown RBP4.67□□□□□ -1.66
GTF3A-207ENST00000482655 CATIPQ7Z7H3 387 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 FAM90A1Q86YD7 464 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 SH2D3CQ8N5H7 860 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 LRIG1Q96JA1 1093 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 TINAGL1Q9GZM7 467 aaPredicted RBP4.67□□□□□ -1.66
GTF3A-207ENST00000482655 GPR35Q9HC97 309 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 KLC4Q9NSK0 619 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 GABBR1Q9UBS5 961 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 PNMA8BQ9ULN7 279 aaPredicted RBP4.67□□□□□ -1.66
GTF3A-207ENST00000482655 NOB1Q9ULX3 412 aaKnown RBP4.67□□□□□ -1.66
GTF3A-207ENST00000482655 PTPRMP28827 1452 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 ARID4BQ4LE39 1312 aaPredicted RBP4.67□□□□□ -1.66
GTF3A-207ENST00000482655 SPATA31A3Q5VYP0 1347 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 KDM5BQ9UGL1 1544 aa4.67□□□□□ -1.66
GTF3A-207ENST00000482655 SIGLEC1Q9BZZ2 1709 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 ZCCHC11Q5TAX3 1644 aaKnown RBP4.66□□□□□ -1.66
GTF3A-207ENST00000482655 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 CCDC194A0A1B0GVG4 234 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 VPS4BO75351 444 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 PROP1O75360 226 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 URI1O94763 535 aaPredicted RBP4.66□□□□□ -1.66
GTF3A-207ENST00000482655 KIF20AO95235 890 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 MATN4O95460 622 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 TTLL1O95922 423 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 POU2F2P09086 479 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 PF4V1P10720 104 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 CHRM3P20309 590 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 LPOP22079 712 aaPredicted RBP4.66□□□□□ -1.66
GTF3A-207ENST00000482655 MAP2K6P52564 334 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 ZKSCAN2Q63HK3 967 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 TAF2Q6P1X5 1199 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 TMPRSS9Q7Z410 1059 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 TCEAL8Q8IYN2 117 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 BRIX1Q8TDN6 353 aaKnown RBP4.66□□□□□ -1.66
GTF3A-207ENST00000482655 MTFMTQ96DP5 389 aaKnown RBP4.66□□□□□ -1.66
GTF3A-207ENST00000482655 OSBPL9Q96SU4 736 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 MAP3K14Q99558 947 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 ALG8Q9BVK2 526 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 RTFDC1Q9BY42 306 aaPredicted RBP4.66□□□□□ -1.66
GTF3A-207ENST00000482655 TCF7L1Q9HCS4 588 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.66□□□□□ -1.66
GTF3A-207ENST00000482655 ETAA1Q9NY74 926 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 RAD54BQ9Y620 910 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 UHRF1BP1LA0JNW5 1464 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 DISP1Q96F81 1524 aa4.66□□□□□ -1.66
GTF3A-207ENST00000482655 PCF11O94913 1555 aaKnown RBP4.65□□□□□ -1.66
GTF3A-207ENST00000482655 PTPRGP23470 1445 aa4.65□□□□□ -1.66
GTF3A-207ENST00000482655 PLB1Q6P1J6 1458 aa4.65□□□□□ -1.66
GTF3A-207ENST00000482655 LRRC3CA6NJW4 275 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 LINC00473A8K010 186 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 H3BUI4 141 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 GCOM1H8Y6P7 765 aaPredicted RBP4.65□□□□□ -1.67
GTF3A-207ENST00000482655 M0QYG6 137 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 TYRP14679 529 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 AKAP5P24588 427 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 CD6P30203 668 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 SOX10P56693 466 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 NHLH1Q02575 133 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 PLAC9Q5JTB6 97 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 RBM20Q5T481 1227 aaKnown RBP4.65□□□□□ -1.67
GTF3A-207ENST00000482655 USP37Q86T82 979 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 PRR18Q8N4B5 295 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 MAGEB6Q8N7X4 407 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 FKBP10Q96AY3 582 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 SARAFQ96BY9 339 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 MVB12AQ96EY5 273 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 PBKQ96KB5 322 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 HAPLN3Q96S86 360 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 NUP88Q99567 741 aaPredicted RBP4.65□□□□□ -1.67
GTF3A-207ENST00000482655 TIMP4Q99727 224 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 POLR3GLQ9BT43 218 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 ACTRT3Q9BYD9 372 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 RHOBTB2Q9BYZ6 727 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 MRPL46Q9H2W6 279 aaKnown RBP4.65□□□□□ -1.67
GTF3A-207ENST00000482655 SMOC2Q9H3U7 446 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 PNPOQ9NVS9 261 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 ARPP21Q9UBL0 812 aaPredicted RBP4.65□□□□□ -1.67
GTF3A-207ENST00000482655 PCDHA1Q9Y5I3 950 aa4.65□□□□□ -1.67
GTF3A-207ENST00000482655 MADDQ8WXG6 1647 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms