RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 FBXL13Q8NEE6 735 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 FAM200AQ8TCP9 573 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 WHAMMQ8TF30 809 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 SLC22A17Q8WUG5 538 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 KAT5Q92993 513 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 ZNF560Q96MR9 790 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 NAP1L5Q96NT1 182 aaPredicted RBP7.49□□□□□ -1.21
LIMD1-204ENST00000474665 KLHL5Q96PQ7 755 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 PKMYT1Q99640 499 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 LPIN3Q9BQK8 851 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 TUBGCP2Q9BSJ2 902 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 CRACR2AQ9BSW2 395 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 BCO2Q9BYV7 579 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 NDST4Q9H3R1 872 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 SIX2Q9NPC8 291 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 ENTPD7Q9NQZ7 604 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 TMLHEQ9NVH6 421 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 RAB20Q9NX57 234 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 FNIP2Q9P278 1114 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 NXF1Q9UBU9 619 aaKnown RBP7.49□□□□□ -1.21
LIMD1-204ENST00000474665 HMGXB4Q9UGU5 601 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 PUF60Q9UHX1 559 aaKnown RBP7.49□□□□□ -1.21
LIMD1-204ENST00000474665 FBXL5Q9UKA1 691 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 AJAP1Q9UKB5 411 aaPredicted RBP7.49□□□□□ -1.21
LIMD1-204ENST00000474665 BACE2Q9Y5Z0 518 aa7.49□□□□□ -1.21
LIMD1-204ENST00000474665 GREB1Q4ZG55 1949 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 ZNF638Q14966 1978 aaKnown RBP7.48□□□□□ -1.21
LIMD1-204ENST00000474665 CYSRT1A8MQ03 144 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 P4HA2O15460 535 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 TEX33O43247 280 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 STX10O60499 249 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 ATP2C2O75185 946 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 TACC1O75410 805 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 ABLIM3O94929 683 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 URODP06132 367 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 WEE2P0C1S8 567 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 OR4Q2P0C623 313 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 ODC1P11926 461 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 EPCAMP16422 314 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 SLC9A1P19634 815 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 ACO1P21399 889 aaKnown RBP7.48□□□□□ -1.21
LIMD1-204ENST00000474665 WARSP23381 471 aaKnown RBP7.48□□□□□ -1.21
LIMD1-204ENST00000474665 PAX3P23760 479 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 PON1P27169 355 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 ATICP31939 592 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 OR1D2P34982 312 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 PIK3CAP42336 1068 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 MTIF2P46199 727 aaKnown RBP7.48□□□□□ -1.21
LIMD1-204ENST00000474665 NRIP1P48552 1158 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 KLK7P49862 253 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 COPB1P53618 953 aaKnown RBP7.48□□□□□ -1.21
LIMD1-204ENST00000474665 MYL7Q01449 175 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 MYO1EQ12965 1108 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 DUSP6Q16828 381 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 TPD52L1Q16890 204 aaPredicted RBP7.48□□□□□ -1.21
LIMD1-204ENST00000474665 SV2CQ496J9 727 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 VWA3BQ502W6 1294 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 CWF19L1Q69YN2 538 aaKnown RBP7.48□□□□□ -1.21
LIMD1-204ENST00000474665 OVOS1Q6IE37 1185 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 PDE12Q6L8Q7 609 aaKnown RBP7.48□□□□□ -1.21
LIMD1-204ENST00000474665 GJB7Q6PEY0 223 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 DSTYKQ6XUX3 929 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 USP37Q86T82 979 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 CREBRFQ8IUR6 639 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 GLYCTKQ8IVS8 523 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 ARHGEF19Q8IW93 802 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 TOP6BLQ8N6T0 577 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 DTWD2Q8NBA8 298 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 EHBP1Q8NDI1 1231 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 APPL2Q8NEU8 664 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 MICAL1Q8TDZ2 1067 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 TAF4BQ92750 862 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 KREMEN1Q96MU8 473 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 TWNKQ96RR1 684 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 NAT10Q9H0A0 1025 aaKnown RBP7.48□□□□□ -1.21
LIMD1-204ENST00000474665 VPS16Q9H269 839 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 CRISPLD1Q9H336 500 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 TSPY26PQ9H489 355 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 MRPL17Q9NRX2 175 aaKnown RBP7.48□□□□□ -1.21
LIMD1-204ENST00000474665 CDY1Q9Y6F8 540 aa7.48□□□□□ -1.21
LIMD1-204ENST00000474665 F5P12259 2224 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 WDR27A2RRH5 827 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 MYBPHLA2RUH7 354 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 GTPBP10A4D1E9 387 aaKnown RBP7.47□□□□□ -1.21
LIMD1-204ENST00000474665 LGALS16A8MUM7 142 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 EPHB6O15197 1021 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 AP5Z1O43299 807 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 TGM5O43548 720 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 HUS1O60921 280 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 NOL4O94818 638 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 SEC24AO95486 1093 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 CAVIN2O95810 425 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 SPATA31D3P0C874 917 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
LIMD1-204ENST00000474665 NPR3P17342 541 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 SDHBP21912 280 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 ACAT1P24752 427 aaKnown RBP7.47□□□□□ -1.21
LIMD1-204ENST00000474665 CLCN4P51793 760 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 ROR1Q01973 937 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 YWHAHQ04917 246 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms