RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 LRRIQ3A6PVS8 624 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-226ENST00000473066 DPYSL4O14531 572 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 GABRDO14764 452 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 STAU1O95793 577 aaKnown RBP16.69■□□□□ 0.26
MRPL55-226ENST00000473066 CSH1P0DML2 217 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 CSH2P0DML3 217 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 KRT13P13646 458 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 WARSP23381 471 aaKnown RBP16.69■□□□□ 0.26
MRPL55-226ENST00000473066 CASP4P49662 377 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 PNOCQ13519 176 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 MLF2Q15773 248 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-226ENST00000473066 WDR72Q3MJ13 1102 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 GPR158Q5T848 1215 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 TANGO2Q6ICL3 276 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 YAF2Q8IY57 180 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 FMR1NBQ8N0W7 255 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-226ENST00000473066 PRSS33Q8NF86 280 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 PARD3BQ8TEW8 1205 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 DEPDC1BQ8WUY9 529 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 E2F7Q96AV8 911 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 FUBP3Q96I24 572 aaKnown RBP eCLIP16.69■□□□□ 0.26
MRPL55-226ENST00000473066 LRRC3Q9BY71 257 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 BRD9Q9H8M2 597 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 ZNF334Q9HCZ1 680 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-226ENST00000473066 TMLHEQ9NVH6 421 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 NXF1Q9UBU9 619 aaKnown RBP16.69■□□□□ 0.26
MRPL55-226ENST00000473066 GTF3C4Q9UKN8 822 aa16.69■□□□□ 0.26
MRPL55-226ENST00000473066 KINO60870 393 aaKnown RBP16.68■□□□□ 0.26
MRPL55-226ENST00000473066 MOSPD3O75425 235 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 P4HA1P13674 534 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 MYL6P60660 151 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 PSMC1P62191 440 aaKnown RBP16.68■□□□□ 0.26
MRPL55-226ENST00000473066 PRKCQQ04759 706 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 NCOA4Q13772 614 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 GRM2Q14416 872 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 ZNF667Q5HYK9 610 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 IER5LQ5T953 404 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 SCARA3Q6AZY7 606 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 PHLDB3Q6NSJ2 640 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 SCN4BQ8IWT1 228 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 OR6B3Q8NGW1 331 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 TMC2Q8TDI7 906 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 TMEM174Q8WUU8 243 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 KBTBD7Q8WVZ9 684 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 DNASE1L2Q92874 299 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 SMARCE1Q969G3 411 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 TRMT61BQ9BVS5 477 aaKnown RBP16.68■□□□□ 0.26
MRPL55-226ENST00000473066 GTPBP4Q9BZE4 634 aaKnown RBP16.68■□□□□ 0.26
MRPL55-226ENST00000473066 UXTQ9UBK9 157 aaPredicted RBP16.68■□□□□ 0.26
MRPL55-226ENST00000473066 ZMYM5Q9UJ78 669 aa16.68■□□□□ 0.26
MRPL55-226ENST00000473066 MAGED2Q9UNF1 606 aaPredicted RBP16.68■□□□□ 0.26
MRPL55-226ENST00000473066 HELZP42694 1942 aaKnown RBP16.67■□□□□ 0.26
MRPL55-226ENST00000473066 ANAPC1Q9H1A4 1944 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 MAPK13O15264 365 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 GALR2O43603 387 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-226ENST00000473066 TACC1O75410 805 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 CST3P01034 146 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-226ENST00000473066 PDGFRBP09619 1106 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 NPR3P17342 541 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 PSMC3P17980 439 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 FCARP24071 287 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 PIK3CAP42336 1068 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 CYP4F8P98187 520 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 CYP27A1Q02318 531 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 NFIL3Q16649 462 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 CFAP221Q4G0U5 840 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 TDRD10Q5VZ19 366 aaKnown RBP16.67■□□□□ 0.26
MRPL55-226ENST00000473066 INTS8Q75QN2 995 aaKnown RBP16.67■□□□□ 0.26
MRPL55-226ENST00000473066 GAREM2Q75VX8 874 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 FAM186BQ8IYM0 893 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 PLEKHO2Q8TD55 490 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 ZNF516Q92618 1163 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 IRF7Q92985 503 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 MYLPFQ96A32 169 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 TSG101Q99816 390 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 IMPG2Q9BZV3 1241 aa16.67■□□□□ 0.26
MRPL55-226ENST00000473066 MAGEC2Q9UBF1 373 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-226ENST00000473066 MYBPHLA2RUH7 354 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 A8MXQ7 604 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 HCRTO43612 131 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 COL4A2P08572 1712 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 FAM163BP0C2L3 166 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 TRIM21P19474 475 aaKnown RBP16.66■□□□□ 0.26
MRPL55-226ENST00000473066 CYP2F1P24903 491 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 ANXA13P27216 316 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 GDI1P31150 447 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 PSMC2P35998 433 aaKnown RBP16.66■□□□□ 0.26
MRPL55-226ENST00000473066 GNL1P36915 607 aaPredicted RBP16.66■□□□□ 0.26
MRPL55-226ENST00000473066 VIPR2P41587 438 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 MAGEA11P43364 429 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 VAMP7P51809 220 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 NHLH1Q02575 133 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 SLC44A4Q53GD3 710 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 VITQ6UXI7 678 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 SCARA5Q6ZMJ2 495 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 LIMS2Q7Z4I7 341 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 MRPS31Q92665 395 aaKnown RBP16.66■□□□□ 0.26
MRPL55-226ENST00000473066 ZSWIM3Q96MP5 696 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 TIGD1Q96MW7 591 aa16.66■□□□□ 0.26
MRPL55-226ENST00000473066 GSDMAQ96QA5 445 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms