RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 USP18Q9UMW8 372 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 MTF2Q9Y483 593 aaPredicted RBP6.91□□□□□ -1.3
HDAC1-205ENST00000472928 PPME1Q9Y570 386 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 NUMBLQ9Y6R0 609 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 PATJQ8NI35 1801 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 MAST4O15021 2626 aa6.91□□□□□ -1.3
HDAC1-205ENST00000472928 GCN1Q92616 2671 aaKnown RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 KANSL1LA0AUZ9 987 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 LRRIQ4A6NIV6 560 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 GOLGA6L6A8MZA4 724 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 MEN1O00255 615 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 PES1O00541 588 aaKnown RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 TNFRSF10BO14763 440 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 SLC30A4O14863 429 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 MAGEB2O15479 319 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 TEX28O15482 410 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 LAMTOR5O43504 91 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 GAS2O43903 313 aaKnown RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 OFD1O75665 1012 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 DDHD2O94830 711 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 FGFR1OPO95684 399 aaKnown RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 EFEMP2O95967 443 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 NR3C1P04150 777 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 TDGF1P13385 188 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 NR2F2P24468 414 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 MPSTP25325 297 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 EEF1GP26641 437 aaKnown RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 MAPK1P28482 360 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 HOXD13P35453 343 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 AFF1P51825 1210 aaKnown RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 COPB1P53618 953 aaKnown RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 GPC5P78333 572 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 RELBQ01201 579 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 DRP2Q13474 957 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 PPP2R5AQ15172 486 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 TEAD4Q15561 434 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 EDRF1Q3B7T1 1238 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 CCDC40Q4G0X9 1142 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 FILIP1LQ4L180 1135 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 TCP11X2Q5H9J9 407 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 PPM1JQ5JR12 505 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 COX20Q5RI15 118 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 EFCAB12Q6NXP0 572 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 FOXR2Q6PJQ5 311 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 GLB1LQ6UWU2 654 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 GET4Q7L5D6 327 aaPredicted RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 HS2ST1Q7LGA3 356 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 TAS1R1Q7RTX1 841 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 ZNF720Q7Z2F6 126 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 TMC6Q7Z403 805 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 HAUS6Q7Z4H7 955 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 MTERF4Q7Z6M4 381 aaKnown RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 CREBRFQ8IUR6 639 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 RNF168Q8IYW5 571 aaPredicted RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 SYCP3Q8IZU3 236 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 MEIOBQ8N635 442 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 ZNF507Q8TCN5 953 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 ZDHHC1Q8WTX9 485 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 ATRIPQ8WXE1 791 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 PSPC1Q8WXF1 523 aaKnown RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 SMG7Q92540 1137 aaKnown RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 FGF14Q92915 247 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 HVCN1Q96D96 273 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 MYO19Q96H55 970 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 CEP63Q96MT8 703 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 ACCSQ96QU6 501 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 RPS6KC1Q96S38 1066 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 JPH2Q9BR39 696 aaPredicted RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 HERC2P3Q9BVR0 1158 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 BCO2Q9BYV7 579 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 OSBPL6Q9BZF3 934 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 GBP3Q9H0R5 595 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 IKZF4Q9H2S9 585 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 C17orf75Q9HAS0 396 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 RXFP1Q9HBX9 757 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 LTB4R2Q9NPC1 389 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 PRMT8Q9NR22 394 aaPredicted RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 CHST12Q9NRB3 414 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 MRPL17Q9NRX2 175 aaKnown RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 MARCH5Q9NX47 278 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 LIMA1Q9UHB6 759 aaKnown RBP6.9□□□□□ -1.3
HDAC1-205ENST00000472928 INPP5FQ9Y2H2 1132 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 PHLPP2Q6ZVD8 1323 aa6.9□□□□□ -1.3
HDAC1-205ENST00000472928 A0A1B0GTH6 734 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 SERTM1A2A2V5 107 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 SHISA7A6NL88 538 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 LGALS16A8MUM7 142 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 H0YCG3 227 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 PDXKO00764 312 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 C2CD2LO14523 706 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 N4BP3O15049 544 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 SLC16A3O15427 465 aaKnown RBP6.89□□□□□ -1.31
HDAC1-205ENST00000472928 TBC1D4O60343 1298 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 ZNF623O75123 536 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 MAFO75444 373 aaPredicted RBP6.89□□□□□ -1.31
HDAC1-205ENST00000472928 GLUD1P00367 558 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 SOD2P04179 222 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 GLRA2P23416 452 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 ARL2P36404 184 aa6.89□□□□□ -1.31
HDAC1-205ENST00000472928 NAMPTP43490 491 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms