RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 KBTBD2Q8IY47 623 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 CELF5Q8N6W0 485 aaKnown RBP6.77□□□□□ -1.33
CKS1B-204ENST00000471245 DNAJC5GQ8N7S2 189 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 POF1BQ8WVV4 589 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 BRI3BPQ8WY22 251 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 NMD3Q96D46 503 aaKnown RBP6.77□□□□□ -1.33
CKS1B-204ENST00000471245 BORCS6Q96GS4 357 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 C1orf43Q9BWL3 253 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 WDR12Q9GZL7 423 aaKnown RBP6.77□□□□□ -1.33
CKS1B-204ENST00000471245 CERS4Q9HA82 394 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 GPRC5BQ9NZH0 403 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 SLC23A1Q9UHI7 598 aa6.77□□□□□ -1.33
CKS1B-204ENST00000471245 MON2Q7Z3U7 1717 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 A0A1B0GTL3 188 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 POM121BA6NF01 834 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 CXorf49A8MYA2 514 aaPredicted RBP6.76□□□□□ -1.33
CKS1B-204ENST00000471245 B5MCH6 92 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 AHSGP02765 367 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 SNRPA1P09661 255 aaKnown RBP6.76□□□□□ -1.33
CKS1B-204ENST00000471245 ATP5JP18859 108 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 SUMO3P55854 103 aaPredicted RBP6.76□□□□□ -1.33
CKS1B-204ENST00000471245 CCDC93Q567U6 631 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 FAM124AQ86V42 546 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 ADGRG2Q8IZP9 1017 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 RNF152Q8N8N0 203 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 NLGN4YQ8NFZ3 816 aaPredicted RBP6.76□□□□□ -1.33
CKS1B-204ENST00000471245 OR6B3Q8NGW1 331 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 PACSIN1Q9BY11 444 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 PPCSQ9HAB8 311 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 FAM30AQ9NZY2 134 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 CFAP97Q9P2B7 532 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 NCDNQ9UBB6 729 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 CPNE7Q9UBL6 633 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 LRCH1Q9Y2L9 728 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 RAB3GAP2Q9H2M9 1393 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 FAM208AQ9UK61 1670 aaKnown RBP6.76□□□□□ -1.33
CKS1B-204ENST00000471245 RGPD2P0DJD1 1756 aa6.76□□□□□ -1.33
CKS1B-204ENST00000471245 CICQ96RK0 1608 aaPredicted RBP6.76□□□□□ -1.33
CKS1B-204ENST00000471245 PCNTO95613 3336 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 MATN2O00339 956 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 NCK2O43639 380 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 FGF18O76093 207 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 PARP1P09874 1014 aaKnown RBP6.75□□□□□ -1.33
CKS1B-204ENST00000471245 TYRP1P17643 537 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 PPM1AP35813 382 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 SLURP1P55000 103 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 RIN1Q13671 783 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 RAPGEF1Q13905 1077 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 HABP2Q14520 560 aaPredicted RBP6.75□□□□□ -1.33
CKS1B-204ENST00000471245 KIF22Q14807 665 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 ACAP1Q15027 740 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 FAM209BQ5JX69 171 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 ZNF783Q6ZMS7 281 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 LCNL1Q6ZST4 164 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 FRMD5Q7Z6J6 570 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 TNPO1Q92973 898 aaKnown RBP6.75□□□□□ -1.33
CKS1B-204ENST00000471245 KIAA1191Q96A73 305 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 P2RX7Q99572 595 aaKnown RBP6.75□□□□□ -1.33
CKS1B-204ENST00000471245 HERPUD2Q9BSE4 406 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 NDC1Q9BTX1 674 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 CRB3Q9BUF7 120 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 MRI1Q9BV20 369 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 BRIP1Q9BX63 1249 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 KRTAP17-1Q9BYP8 105 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 VPS11Q9H270 941 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 ADAM7Q9H2U9 754 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 TFCP2L1Q9NZI6 479 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 JKAMPQ9P055 326 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 TOGARAM1Q9Y4F4 1720 aa6.75□□□□□ -1.33
CKS1B-204ENST00000471245 KIAA1551Q9HCM1 1747 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 A0A1W2PPC4 97 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 TRIM43BA6NCK2 446 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 SLC43A1O75387 559 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 ANXA1P04083 346 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 ALAS1P13196 640 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 RAC3P60763 192 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 TNFAIP2Q03169 654 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 EXOSC9Q06265 439 aaKnown RBP6.74□□□□□ -1.33
CKS1B-204ENST00000471245 KIAA2012Q0VF49 1180 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 TMEM95Q3KNT9 176 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 HSP90AB4PQ58FF6 505 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 ANO1Q5XXA6 986 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 BORAQ6PGQ7 559 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 ZNF365Q70YC5 407 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 PLEKHH3Q7Z736 793 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 PDSS2Q86YH6 399 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 SP8Q8IXZ3 490 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 KCNH5Q8NCM2 988 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 SHCBP1Q8NEM2 672 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 OR10H5Q8NGA6 315 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 PPM1EQ8WY54 764 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 TRIM43Q96BQ3 446 aaPredicted RBP6.74□□□□□ -1.33
CKS1B-204ENST00000471245 TCF25Q9BQ70 676 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 BRD9Q9H8M2 597 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.74□□□□□ -1.33
CKS1B-204ENST00000471245 COL20A1Q9P218 1284 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 UBR3Q6ZT12 1888 aa6.74□□□□□ -1.33
CKS1B-204ENST00000471245 KIF13BQ9NQT8 1826 aa6.73□□□□□ -1.33
CKS1B-204ENST00000471245 N4BP2Q86UW6 1770 aaPredicted RBP6.73□□□□□ -1.33
CKS1B-204ENST00000471245 UBE2QL1A1L167 161 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms