RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 NFE2Q16621 373 aaPredicted RBP16.48■□□□□ 0.23
VARS-219ENST00000461328 SOWAHAQ2M3V2 549 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 SLC44A4Q53GD3 710 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 ZNF658Q5TYW1 1059 aaPredicted RBP16.48■□□□□ 0.23
VARS-219ENST00000461328 ALYREFQ86V81 257 aaKnown RBP16.48■□□□□ 0.23
VARS-219ENST00000461328 OSTM1Q86WC4 334 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 CCDC105Q8IYK2 499 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 FAM186BQ8IYM0 893 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 ZSCAN18Q8TBC5 510 aaPredicted RBP16.48■□□□□ 0.23
VARS-219ENST00000461328 SPATA18Q8TC71 538 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 PLEKHO2Q8TD55 490 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 PARD3BQ8TEW8 1205 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 SMARCD2Q92925 531 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
VARS-219ENST00000461328 TSG101Q99816 390 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 ACBD6Q9BR61 282 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 GTPBP4Q9BZE4 634 aaKnown RBP16.48■□□□□ 0.23
VARS-219ENST00000461328 GPR88Q9GZN0 384 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 SNX25Q9H3E2 840 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 FAM86C1Q9NVL1 165 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 NXF1Q9UBU9 619 aaKnown RBP16.48■□□□□ 0.23
VARS-219ENST00000461328 PCDHB5Q9Y5E4 795 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 GABRR2P28476 465 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 STARD6P59095 220 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 MYL6P60660 151 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 PRKCQQ04759 706 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 STIM1Q13586 685 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 GRM2Q14416 872 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 NFIL3Q16649 462 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 ZNF699Q32M78 642 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 WDR72Q3MJ13 1102 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 INTS6LQ5JSJ4 861 aaKnown RBP16.47■□□□□ 0.23
VARS-219ENST00000461328 TDRD10Q5VZ19 366 aaKnown RBP16.47■□□□□ 0.23
VARS-219ENST00000461328 DTWD2Q8NBA8 298 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 TMC2Q8TDI7 906 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 GIPC2Q8TF65 315 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 TMEM174Q8WUU8 243 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 ZNF516Q92618 1163 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 GCNAQ96QF7 691 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 SYT15Q9BQS2 421 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 TRMT61BQ9BVS5 477 aaKnown RBP16.47■□□□□ 0.23
VARS-219ENST00000461328 GZF1Q9H116 711 aaPredicted RBP16.47■□□□□ 0.23
VARS-219ENST00000461328 ATXN3LQ9H3M9 355 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 BRD9Q9H8M2 597 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 ZNF334Q9HCZ1 680 aaPredicted RBP16.47■□□□□ 0.23
VARS-219ENST00000461328 TMLHEQ9NVH6 421 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 SIT1Q9Y3P8 196 aa16.47■□□□□ 0.23
VARS-219ENST00000461328 HCRTO43612 131 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 AKAP3O75969 853 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 CST3P01034 146 aaPredicted RBP16.46■□□□□ 0.23
VARS-219ENST00000461328 EPB41P11171 864 aaKnown RBP16.46■□□□□ 0.23
VARS-219ENST00000461328 ATICP31939 592 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 PSMC2P35998 433 aaKnown RBP16.46■□□□□ 0.23
VARS-219ENST00000461328 VIPR2P41587 438 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 PIK3CAP42336 1068 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 PRCPP42785 496 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 MRE11P49959 708 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 VAMP7P51809 220 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 PSMC1P62191 440 aaKnown RBP16.46■□□□□ 0.23
VARS-219ENST00000461328 DLG4P78352 724 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 ADAM9Q13443 819 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 NCOA4Q13772 614 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 EDRF1Q3B7T1 1238 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 ARHGAP15Q53QZ3 475 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 ISM2Q6H9L7 571 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 INTS8Q75QN2 995 aaKnown RBP16.46■□□□□ 0.23
VARS-219ENST00000461328 DPH6Q7L8W6 267 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 SPATA2LQ8IUW3 424 aaPredicted RBP16.46■□□□□ 0.23
VARS-219ENST00000461328 PHOX2BQ99453 314 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 PI4K2AQ9BTU6 479 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 FOXQ1Q9C009 403 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 MMRN2Q9H8L6 949 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 GTF3C4Q9UKN8 822 aa16.46■□□□□ 0.23
VARS-219ENST00000461328 CETN3O15182 167 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 MAPK13O15264 365 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 DCNP07585 359 aaKnown RBP16.45■□□□□ 0.22
VARS-219ENST00000461328 PDGFRBP09619 1106 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 TRIM49P0CI25 452 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 TRIM49CP0CI26 452 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 WARSP23381 471 aaKnown RBP16.45■□□□□ 0.22
VARS-219ENST00000461328 CDC25CP30307 473 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 GDI1P31150 447 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 UBE2HP62256 183 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 UBXN2BQ14CS0 331 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 ZCWPW2Q504Y3 356 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 ZNF667Q5HYK9 610 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 STXBP5Q5T5C0 1151 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 GPR158Q5T848 1215 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 VITQ6UXI7 678 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 SCARA5Q6ZMJ2 495 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 TPRG1Q6ZUI0 275 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 GAREM2Q75VX8 874 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 PJA1Q8NG27 643 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 OR6B3Q8NGW1 331 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 DEPDC1BQ8WUY9 529 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 KBTBD7Q8WVZ9 684 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 E2F7Q96AV8 911 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 EEF2KMTQ96G04 330 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 TRPV4Q9HBA0 871 aa16.45■□□□□ 0.22
VARS-219ENST00000461328 MAN1B1Q9UKM7 699 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms