RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 SLC46A2Q9BY10 475 aa9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 SMG9Q9H0W8 520 aaKnown RBP9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 RBM12Q9NTZ6 932 aaKnown RBP9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 PANK4Q9NVE7 773 aa9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 TMLHEQ9NVH6 421 aa9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 OBP2AQ9NY56 170 aa9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 ABI2Q9NYB9 513 aaPredicted RBP9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 RBAKQ9NYW8 714 aaPredicted RBP9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 GTSE1Q9NYZ3 720 aa9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 NCDNQ9UBB6 729 aa9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 L1RE1Q9UN81 338 aa9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 AGAP1Q9UPQ3 857 aa9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 PCDHB5Q9Y5E4 795 aa9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 CEP250Q9BV73 2442 aa9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 F5P12259 2224 aa9.47□□□□□ -0.89
SOX2-OT-202ENST00000461063 GOLGA8IPA6NC78 632 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 GOLGA8JA6NMD2 632 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 SPECC1L-ADORA2AF8WAN1 911 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 TULP1O00294 542 aaPredicted RBP9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 EXTL3O43909 919 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 LDHAP00338 332 aaKnown RBP9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 F11P03951 625 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 HMGA1P17096 107 aaKnown RBP9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 CTHP32929 405 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 CXCL12P48061 93 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 NRLP54845 237 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 TNK2Q07912 1038 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 ALCAMQ13740 583 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 LRRC32Q14392 662 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 PPP2R5DQ14738 602 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 TAF12Q16514 161 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 RALGPS2Q86X27 583 aaPredicted RBP9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 SYCP3Q8IZU3 236 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 CMTM8Q8IZV2 173 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 SPEM1Q8N4L4 309 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 CSGALNACT2Q8N6G5 542 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 LRRC52Q8N7C0 313 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 BPIFB1Q8TDL5 484 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 CACTINQ8WUQ7 758 aaKnown RBP9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 GCNAQ96QF7 691 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 ZSCAN16Q9H4T2 348 aaPredicted RBP9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 PCIF1Q9H4Z3 704 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 DLL3Q9NYJ7 618 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 ITGA11Q9UKX5 1188 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 TSC2P49815 1807 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 FANCMQ8IYD8 2048 aa9.46□□□□□ -0.9
SOX2-OT-202ENST00000461063 STX6O43752 255 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 HUS1O60921 280 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 PRPF40AO75400 957 aaKnown RBP9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 PRPF6O94906 941 aaKnown RBP9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 TGM1P22735 817 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 NASPP49321 788 aaPredicted RBP9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 GPR15P49685 360 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 NLRP12P59046 1061 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 LSM11P83369 360 aaKnown RBP eCLIP9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 PLCB2Q00722 1185 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 TSPY1Q01534 308 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 DMWDQ09019 674 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 BFSP1Q12934 665 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 PUM1Q14671 1186 aaKnown RBP eCLIP9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 NFE2Q16621 373 aaPredicted RBP9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 DGKKQ5KSL6 1271 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 Q6ZS52 159 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 DGLUCYQ7Z3D6 616 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 GPR161Q8N6U8 529 aaKnown RBP9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 CELF5Q8N6W0 485 aaKnown RBP9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 PDILTQ8N807 584 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 STKLD1Q8NE28 680 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 GLIS3Q8NEA6 775 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 LEO1Q8WVC0 666 aaPredicted RBP9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 SECISBP2LQ93073 1101 aaKnown RBP9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 PKMYT1Q99640 499 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 ACBD6Q9BR61 282 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 PI4K2AQ9BTU6 479 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 TMEM206Q9H813 350 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 PDE11AQ9HCR9 933 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 ABCB6Q9NP58 842 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 THG1LQ9NWX6 298 aaKnown RBP9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 GDAP2Q9NXN4 497 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 SIX4Q9UIU6 781 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 ZMYM5Q9UJ78 669 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 CCL26Q9Y258 94 aa9.45□□□□□ -0.9
SOX2-OT-202ENST00000461063 TICRRQ7Z2Z1 1910 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 NCOR2Q9Y618 2525 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 CHURC1-FNTBB4DL54 471 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 K7ESF4 209 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 GABRDO14764 452 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 HCRTO43612 131 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 PAPSS2O95340 614 aaPredicted RBP9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 KRT19P08727 400 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 TMEM191BP0C7N4 346 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 CSH1P0DML2 217 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 CSH2P0DML3 217 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 ACAT1P24752 427 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 CYP2F1P24903 491 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 HOXD13P35453 343 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 AVPR1AP37288 418 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 FNTBP49356 437 aa9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 RPL10AP62906 217 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-202ENST00000461063 RBP5P82980 135 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms