RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 TSPY1Q01534 308 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 CYP24A1Q07973 514 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 STK4Q13043 487 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 UBXN2BQ14CS0 331 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 PSMD6Q15008 389 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 KNOP1Q1ED39 458 aaKnown RBP13.29□□□□□ -0.28
VEGFA-210ENST00000457104 INTS6LQ5JSJ4 861 aaKnown RBP13.29□□□□□ -0.28
VEGFA-210ENST00000457104 TPRG1Q6ZUI0 275 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 ASCL5Q7RTU5 278 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 TRAPPC11Q7Z392 1133 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 FRMD5Q7Z6J6 570 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 TMEM150AQ86TG1 271 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 ARID3BQ8IVW6 561 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-210ENST00000457104 ADGRF2Q8IZF7 708 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 MAML2Q8IZL2 1156 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-210ENST00000457104 XXYLT1Q8NBI6 393 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 KIAA0895Q8NCT3 520 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 SPATA18Q8TC71 538 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 DEPDC1BQ8WUY9 529 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 KBTBD7Q8WVZ9 684 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 HPDLQ96IR7 371 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 PI4K2AQ9BTU6 479 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 ATXN3LQ9H3M9 355 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 SLITRK6Q9H5Y7 841 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 GTF3C4Q9UKN8 822 aa13.29□□□□□ -0.28
VEGFA-210ENST00000457104 GFRA3O60609 400 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 ATP2C2O75185 946 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 F11P03951 625 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 DLATP10515 647 aaKnown RBP13.28□□□□□ -0.28
VEGFA-210ENST00000457104 CYP2F1P24903 491 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 LMO2P25791 158 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 WEE1P30291 646 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 LHX1P48742 406 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 KRT85P78386 507 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 CYP4F8P98187 520 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 MYL7Q01449 175 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 FCHO2Q0JRZ9 810 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 MYO1EQ12965 1108 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 VEPH1Q14D04 833 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 NFE2Q16621 373 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-210ENST00000457104 KMT5BQ4FZB7 885 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 GPR158Q5T848 1215 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 FAM171BQ6P995 826 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 DPH6Q7L8W6 267 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 HS2ST1Q7LGA3 356 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 C1orf210Q8IVY1 113 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 STKLD1Q8NE28 680 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 FAM200AQ8TCP9 573 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 PLEKHO2Q8TD55 490 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 IRF7Q92985 503 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 E2F7Q96AV8 911 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 CLDN23Q96B33 292 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 CGRRF1Q99675 332 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 ABCB6Q9NP58 842 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 CGNQ9P2M7 1197 aaKnown RBP13.28□□□□□ -0.28
VEGFA-210ENST00000457104 ZNF292O60281 2723 aa13.28□□□□□ -0.28
VEGFA-210ENST00000457104 DMXL1Q9Y485 3027 aa13.27□□□□□ -0.28
VEGFA-210ENST00000457104 RIF1Q5UIP0 2472 aaKnown RBP13.27□□□□□ -0.29
VEGFA-210ENST00000457104 MYBPHLA2RUH7 354 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 PRR23AA6NEV1 266 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 ZNF263O14978 683 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 PRPF40AO75400 957 aaKnown RBP13.27□□□□□ -0.29
VEGFA-210ENST00000457104 PRAMEF12O95522 483 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 TNNI1P19237 187 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 NDUFA8P51970 172 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 NLRP12P59046 1061 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 PSMD2Q13200 908 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 SDHAF4Q5VUM1 108 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 ZNF852Q6ZMS4 543 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 TMEM174Q8WUU8 243 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 CCDC127Q96BQ5 260 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 NELL2Q99435 816 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 SLC46A2Q9BY10 475 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 KCTD10Q9H3F6 313 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 TASP1Q9H6P5 420 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 DMAC2Q9NW81 257 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 USP25Q9UHP3 1055 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 NME7Q9Y5B8 376 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 MYH10P35580 1976 aa13.27□□□□□ -0.29
VEGFA-210ENST00000457104 FAM186AA6NE01 2351 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 CHADO15335 359 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 SP9P0CG40 484 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 WARSP23381 471 aaKnown RBP13.26□□□□□ -0.29
VEGFA-210ENST00000457104 PCSK1P29120 753 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 CDC25CP30307 473 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 RPS9P46781 194 aaKnown RBP13.26□□□□□ -0.29
VEGFA-210ENST00000457104 CASP4P49662 377 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 CLDN10P78369 228 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 DDR2Q16832 855 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 CFAP221Q4G0U5 840 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 ARHGAP15Q53QZ3 475 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 FNBP1Q96RU3 617 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 MRPL45Q9BRJ2 306 aaKnown RBP13.26□□□□□ -0.29
VEGFA-210ENST00000457104 BCO2Q9BYV7 579 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 XYLT2Q9H1B5 865 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 CRTAC1Q9NQ79 661 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 EXOC1Q9NV70 894 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 OBP2AQ9NY56 170 aa13.26□□□□□ -0.29
VEGFA-210ENST00000457104 EXOC3O60645 756 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms