RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-223ENST00000449864 GTF3C4Q9UKN8 822 aa16.93■□□□□ 0.3
HDLBP-223ENST00000449864 MYO16Q9Y6X6 1858 aa16.93■□□□□ 0.3
HDLBP-223ENST00000449864 LRRIQ3A6PVS8 624 aaPredicted RBP16.92■□□□□ 0.3
HDLBP-223ENST00000449864 GABRDO14764 452 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 CST3P01034 146 aaPredicted RBP16.92■□□□□ 0.3
HDLBP-223ENST00000449864 NPR3P17342 541 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 FCARP24071 287 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 NR2F2P24468 414 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 CDC25CP30307 473 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 NUBP1P53384 320 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 MYL6P60660 151 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 PSMC1P62191 440 aaKnown RBP16.92■□□□□ 0.3
HDLBP-223ENST00000449864 SNW1Q13573 536 aaKnown RBP16.92■□□□□ 0.3
HDLBP-223ENST00000449864 GRM2Q14416 872 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 WDR72Q3MJ13 1102 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 GUF1Q8N442 669 aaKnown RBP16.92■□□□□ 0.3
HDLBP-223ENST00000449864 PLEKHO2Q8TD55 490 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 PARD3BQ8TEW8 1205 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 TMEM174Q8WUU8 243 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 KBTBD7Q8WVZ9 684 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 ZNF516Q92618 1163 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 SHDQ96IW2 340 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 ZSWIM3Q96MP5 696 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 PLA2G2FQ9BZM2 168 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 GZF1Q9H116 711 aaPredicted RBP16.92■□□□□ 0.3
HDLBP-223ENST00000449864 ATXN3LQ9H3M9 355 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 NXF1Q9UBU9 619 aaKnown RBP16.92■□□□□ 0.3
HDLBP-223ENST00000449864 HOOK1Q9UJC3 728 aaKnown RBP16.92■□□□□ 0.3
HDLBP-223ENST00000449864 CDH9Q9ULB4 789 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 TRAF3IP3Q9Y228 551 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 WDFY4Q6ZS81 3184 aa16.92■□□□□ 0.3
HDLBP-223ENST00000449864 WARSP23381 471 aaKnown RBP16.91■□□□□ 0.3
HDLBP-223ENST00000449864 ATICP31939 592 aa16.91■□□□□ 0.3
HDLBP-223ENST00000449864 RPL10AP62906 217 aaKnown RBP16.91■□□□□ 0.3
HDLBP-223ENST00000449864 NHLH1Q02575 133 aa16.91■□□□□ 0.3
HDLBP-223ENST00000449864 MAPRE1Q15691 268 aaKnown RBP16.91■□□□□ 0.3
HDLBP-223ENST00000449864 MLF2Q15773 248 aaPredicted RBP16.91■□□□□ 0.3
HDLBP-223ENST00000449864 ZNF699Q32M78 642 aa16.91■□□□□ 0.3
HDLBP-223ENST00000449864 TDRD10Q5VZ19 366 aaKnown RBP16.91■□□□□ 0.3
HDLBP-223ENST00000449864 POTEHQ6S545 545 aa16.91■□□□□ 0.3
HDLBP-223ENST00000449864 C4orf50Q6ZRC1 276 aa16.91■□□□□ 0.3
HDLBP-223ENST00000449864 OR6B3Q8NGW1 331 aa16.91■□□□□ 0.3
HDLBP-223ENST00000449864 PKMYT1Q99640 499 aa16.91■□□□□ 0.3
HDLBP-223ENST00000449864 GALR2O43603 387 aaPredicted RBP16.9■□□□□ 0.3
HDLBP-223ENST00000449864 ATP2C2O75185 946 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 SMC2O95347 1197 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 STAU1O95793 577 aaKnown RBP16.9■□□□□ 0.3
HDLBP-223ENST00000449864 PDGFRBP09619 1106 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 CSH1P0DML2 217 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 CSH2P0DML3 217 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 CYP2F1P24903 491 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
HDLBP-223ENST00000449864 GPR15P49685 360 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 CYP4F8P98187 520 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 CYP27A1Q02318 531 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 NCOA4Q13772 614 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 CCDC142Q17RM4 750 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 CFAP221Q4G0U5 840 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 STXBP5Q5T5C0 1151 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 GPR158Q5T848 1215 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 PHLDB3Q6NSJ2 640 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 VITQ6UXI7 678 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 GAREM2Q75VX8 874 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 LIMS2Q7Z4I7 341 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 SCN4BQ8IWT1 228 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 SMYD4Q8IYR2 804 aaPredicted RBP16.9■□□□□ 0.3
HDLBP-223ENST00000449864 TMC2Q8TDI7 906 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 DEPDC1BQ8WUY9 529 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 FUBP3Q96I24 572 aaKnown RBP eCLIP16.9■□□□□ 0.3
HDLBP-223ENST00000449864 TRMT61BQ9BVS5 477 aaKnown RBP16.9■□□□□ 0.3
HDLBP-223ENST00000449864 BRD9Q9H8M2 597 aa16.9■□□□□ 0.3
HDLBP-223ENST00000449864 MAGED2Q9UNF1 606 aaPredicted RBP16.9■□□□□ 0.3
HDLBP-223ENST00000449864 MYBPHLA2RUH7 354 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 KRT13P13646 458 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 PSMC3P17980 439 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 LMO2P25791 158 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 GNL1P36915 607 aaPredicted RBP16.89■□□□□ 0.29
HDLBP-223ENST00000449864 VIPR2P41587 438 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 DLG4P78352 724 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 CLDN10P78369 228 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 NFIL3Q16649 462 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 DDR2Q16832 855 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 ZNF667Q5HYK9 610 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 SDHAF4Q5VUM1 108 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 SCARA5Q6ZMJ2 495 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 YAF2Q8IY57 180 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 FAM186BQ8IYM0 893 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 STKLD1Q8NE28 680 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 ENGASEQ8NFI3 743 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 DNASE1L2Q92874 299 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 SMARCE1Q969G3 411 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 MYLPFQ96A32 169 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 E2F7Q96AV8 911 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 MRPL45Q9BRJ2 306 aaKnown RBP16.89■□□□□ 0.29
HDLBP-223ENST00000449864 XYLT2Q9H1B5 865 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 IRF2BPLQ9H1B7 796 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 TRPV4Q9HBA0 871 aa16.89■□□□□ 0.29
HDLBP-223ENST00000449864 MAGEC2Q9UBF1 373 aaPredicted RBP16.89■□□□□ 0.29
HDLBP-223ENST00000449864 CIZ1Q9ULV3 898 aaPredicted RBP16.89■□□□□ 0.29
HDLBP-223ENST00000449864 HEPACAM2A8MVW5 462 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms