RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 RMDN1Q96DB5 314 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 CAMKK2Q96RR4 588 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 SLC8A2Q9UPR5 921 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 PHLPP1O60346 1717 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 A0A0A6YYK5 440 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-205ENST00000439160 HSD17B3P37058 310 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 FNTAP49354 379 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 CENPCQ03188 943 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 FBXO47Q5MNV8 452 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 MAP3K21Q5TCX8 1036 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 RNF219Q5W0B1 726 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-205ENST00000439160 WDR93Q6P2C0 686 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 NUDCD3Q8IVD9 361 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 MCOLN2Q8IZK6 566 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 NUF2Q9BZD4 464 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 SARS2Q9NP81 518 aaKnown RBP12.87□□□□□ -0.35
TCOF1-205ENST00000439160 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.87□□□□□ -0.35
TCOF1-205ENST00000439160 C3orf70A6NLC5 250 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-205ENST00000439160 RNF225M0QZC1 329 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-205ENST00000439160 C2CD2LO14523 706 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 CFLARO15519 480 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 AGTP01019 485 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 THP07101 528 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 MDH1P40925 334 aaKnown RBP12.87□□□□□ -0.35
TCOF1-205ENST00000439160 CASP2P42575 452 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 COPS2P61201 443 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 ACCSLQ4AC99 568 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 CELF3Q5SZQ8 465 aaKnown RBP12.87□□□□□ -0.35
TCOF1-205ENST00000439160 FAM131BQ86XD5 332 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 ADGRF2Q8IZF7 708 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 ELMOD1Q8N336 334 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 MYCBPQ99417 103 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-205ENST00000439160 KCTD10Q9H3F6 313 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 KIAA1257Q9ULG3 409 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 L1RE1Q9UN81 338 aa12.87□□□□□ -0.35
TCOF1-205ENST00000439160 CASTOR2A6NHX0 329 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 LACTBL1A8MY62 500 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 NKRFO15226 690 aaKnown RBP eCLIP12.86□□□□□ -0.35
TCOF1-205ENST00000439160 TGFB1I1O43294 461 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 PSTPIP1O43586 416 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 MCF2P10911 925 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 RASSF3Q86WH2 238 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 ACTRT1Q8TDG2 376 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 HDAC7Q8WUI4 952 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 MAGEB5Q9BZ81 275 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 PAK5Q9P286 719 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 SLIT2O94813 1529 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 CFAP69A5D8W1 941 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 MANSC4A6NHS7 340 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-205ENST00000439160 GJB6O95452 261 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 NDST1P52848 882 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 SRLQ86TD4 932 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 DCP1BQ8IZD4 617 aaKnown RBP12.86□□□□□ -0.35
TCOF1-205ENST00000439160 FAM172AQ8WUF8 416 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 PRMT1Q99873 361 aaKnown RBP12.86□□□□□ -0.35
TCOF1-205ENST00000439160 ZNF518BQ9C0D4 1074 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 TRPC7Q9HCX4 862 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 IGKV6D-41A0A0C4DH26 115 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 GJB1P08034 283 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 CHN1P15882 459 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 HSPA9P38646 679 aaKnown RBP12.86□□□□□ -0.35
TCOF1-205ENST00000439160 DBN1Q16643 649 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 SPATA24Q86W54 205 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 ATPAF2Q8N5M1 289 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 FBXO41Q8TF61 875 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 RXFP2Q8WXD0 754 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 TINF2Q9BSI4 451 aa12.86□□□□□ -0.35
TCOF1-205ENST00000439160 TCP11X1B4DZS4 312 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 ACAT1P24752 427 aaKnown RBP12.85□□□□□ -0.35
TCOF1-205ENST00000439160 AGR3Q8TD06 166 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 TAS2R14Q9NYV8 317 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 GGT7Q9UJ14 662 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 UBA6A0AVT1 1052 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-205ENST00000439160 SPATA31C2B4DYI2 1134 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 PLA2G6O60733 806 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 CCNE2O96020 404 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 GHRP10912 638 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 ATN1P54259 1190 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-205ENST00000439160 TFDP3Q5H9I0 405 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 ICE2Q659A1 982 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 SCG3Q8WXD2 468 aaKnown RBP12.85□□□□□ -0.35
TCOF1-205ENST00000439160 ALKBH8Q96BT7 664 aaKnown RBP12.85□□□□□ -0.35
TCOF1-205ENST00000439160 ANKZF1Q9H8Y5 726 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 ACTR5Q9H9F9 607 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-205ENST00000439160 CYP3A43Q9HB55 503 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 TOPAZ1Q8N9V7 1692 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 PRRG1O14668 218 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 POMCP01189 267 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 NUMBP49757 651 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 OTUD4Q01804 1114 aaKnown RBP12.85□□□□□ -0.35
TCOF1-205ENST00000439160 OCRLQ01968 901 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 NSUN2Q08J23 767 aaKnown RBP eCLIP12.85□□□□□ -0.35
TCOF1-205ENST00000439160 MFSD10Q14728 455 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 PDK1Q15118 436 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 SLC27A1Q6PCB7 646 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 LRIG3Q6UXM1 1119 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 CEP120Q8N960 986 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 INPP4AQ96PE3 977 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-205ENST00000439160 TMEM121Q9BTD3 319 aa12.85□□□□□ -0.35
TCOF1-205ENST00000439160 ASB7Q9H672 318 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms