RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ACBD6Q9BR61 282 aa19.76■□□□□ 0.75
PSPC1-202ENST00000427943 IL21Q9HBE4 155 aa19.76■□□□□ 0.75
PSPC1-202ENST00000427943 EXOC1Q9NV70 894 aa19.76■□□□□ 0.75
PSPC1-202ENST00000427943 GTF3C4Q9UKN8 822 aa19.76■□□□□ 0.75
PSPC1-202ENST00000427943 HELZP42694 1942 aaKnown RBP19.75■□□□□ 0.75
PSPC1-202ENST00000427943 PROB1E7EW31 1015 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 FGF19O95750 216 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 TNNI1P19237 187 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 PSMD6Q15008 389 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 NFE2Q16621 373 aaPredicted RBP19.75■□□□□ 0.75
PSPC1-202ENST00000427943 ARHGAP15Q53QZ3 475 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 SDHAF4Q5VUM1 108 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 ASCL5Q7RTU5 278 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 TRAPPC11Q7Z392 1133 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 ARID3BQ8IVW6 561 aaPredicted RBP19.75■□□□□ 0.75
PSPC1-202ENST00000427943 MFSD6LQ8IWD5 586 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 KIAA0895Q8NCT3 520 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 IRF7Q92985 503 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 GCNAQ96QF7 691 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 FNBP1Q96RU3 617 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 PKMYT1Q99640 499 aa19.75■□□□□ 0.75
PSPC1-202ENST00000427943 SHISA7A6NL88 538 aa19.74■□□□□ 0.75
PSPC1-202ENST00000427943 ZNF263O14978 683 aa19.74■□□□□ 0.75
PSPC1-202ENST00000427943 PRAMEF12O95522 483 aa19.74■□□□□ 0.75
PSPC1-202ENST00000427943 CMA1P23946 247 aa19.74■□□□□ 0.75
PSPC1-202ENST00000427943 CDC25CP30307 473 aa19.74■□□□□ 0.75
PSPC1-202ENST00000427943 STK4Q13043 487 aa19.74■□□□□ 0.75
PSPC1-202ENST00000427943 KNOP1Q1ED39 458 aaKnown RBP19.74■□□□□ 0.75
PSPC1-202ENST00000427943 KMT5BQ4FZB7 885 aa19.74■□□□□ 0.75
PSPC1-202ENST00000427943 C1orf210Q8IVY1 113 aa19.74■□□□□ 0.75
PSPC1-202ENST00000427943 KBTBD7Q8WVZ9 684 aa19.74■□□□□ 0.75
PSPC1-202ENST00000427943 BCO2Q9BYV7 579 aa19.74■□□□□ 0.75
PSPC1-202ENST00000427943 MAGED2Q9UNF1 606 aaPredicted RBP19.74■□□□□ 0.75
PSPC1-202ENST00000427943 HPSEQ9Y251 543 aa19.74■□□□□ 0.75
PSPC1-202ENST00000427943 F5P12259 2224 aa19.74■□□□□ 0.75
PSPC1-202ENST00000427943 PRR23AA6NEV1 266 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 GABRDO14764 452 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 ATP2C2O75185 946 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 CYP2F1P24903 491 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 LHX1P48742 406 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 PSMC1P62191 440 aaKnown RBP19.73■□□□□ 0.75
PSPC1-202ENST00000427943 SNRPFP62306 86 aaKnown RBP19.73■□□□□ 0.75
PSPC1-202ENST00000427943 DDR2Q16832 855 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 ZNF852Q6ZMS4 543 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 C12orf56Q8IXR9 622 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 YAF2Q8IY57 180 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 E2F7Q96AV8 911 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 SYT15Q9BQS2 421 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 OSBPL6Q9BZF3 934 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 SMG9Q9H0W8 520 aaKnown RBP19.73■□□□□ 0.75
PSPC1-202ENST00000427943 GZF1Q9H116 711 aaPredicted RBP19.73■□□□□ 0.75
PSPC1-202ENST00000427943 SPATA6Q9NWH7 488 aaPredicted RBP19.73■□□□□ 0.75
PSPC1-202ENST00000427943 NDRG2Q9UN36 371 aaKnown RBP19.73■□□□□ 0.75
PSPC1-202ENST00000427943 PIAS3Q9Y6X2 628 aa19.73■□□□□ 0.75
PSPC1-202ENST00000427943 MYBPHLA2RUH7 354 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 DPYSL4O14531 572 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 EXOC3O60645 756 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 CST3P01034 146 aaPredicted RBP19.72■□□□□ 0.75
PSPC1-202ENST00000427943 PRR29P0C7W0 189 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 HMGA1P17096 107 aaKnown RBP19.72■□□□□ 0.75
PSPC1-202ENST00000427943 PCSK1P29120 753 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 NDUFA8P51970 172 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 TMEM150AQ86TG1 271 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 SPATA2LQ8IUW3 424 aaPredicted RBP19.72■□□□□ 0.75
PSPC1-202ENST00000427943 SPATA18Q8TC71 538 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 PLEKHO2Q8TD55 490 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 ZNF516Q92618 1163 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 NKD2Q969F2 451 aaPredicted RBP19.72■□□□□ 0.75
PSPC1-202ENST00000427943 ZFYVE19Q96K21 471 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 LRRC3BQ96PB8 259 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 MMS19Q96T76 1030 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 TASP1Q9H6P5 420 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 CGNQ9P2M7 1197 aaKnown RBP19.72■□□□□ 0.75
PSPC1-202ENST00000427943 R4GN57 208 aa19.72■□□□□ 0.75
PSPC1-202ENST00000427943 ARNTLO00327 626 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 SP9P0CG40 484 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 CSH1P0DML2 217 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 CSH2P0DML3 217 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 LMO2P25791 158 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 SYKP43405 635 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 CASP4P49662 377 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 NLRP12P59046 1061 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 FCHO2Q0JRZ9 810 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 DPH6Q7L8W6 267 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 LIMS2Q7Z4I7 341 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 SCN4BQ8IWT1 228 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 SLC46A2Q9BY10 475 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 GDPD2Q9HCC8 539 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 ABCB6Q9NP58 842 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 TRPV5Q9NQA5 729 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 USP25Q9UHP3 1055 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 MRPS17Q9Y2R5 130 aaKnown RBP19.71■□□□□ 0.75
PSPC1-202ENST00000427943 DMDP11532 3685 aa19.71■□□□□ 0.75
PSPC1-202ENST00000427943 MYH10P35580 1976 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 SLC38A8A6NNN8 435 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 CHADO15335 359 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 F11P03951 625 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 PDGFRBP09619 1106 aa19.7■□□□□ 0.74
PSPC1-202ENST00000427943 WARSP23381 471 aaKnown RBP19.7■□□□□ 0.74
PSPC1-202ENST00000427943 RPL10AP62906 217 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms