RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 GNL1P36915 607 aaPredicted RBP22.12■■□□□ 1.13
HSPG2-205ENST00000427897 GRM2Q14416 872 aa22.12■■□□□ 1.13
HSPG2-205ENST00000427897 MAPRE1Q15691 268 aaKnown RBP22.12■■□□□ 1.13
HSPG2-205ENST00000427897 OSTM1Q86WC4 334 aa22.12■■□□□ 1.13
HSPG2-205ENST00000427897 TMC8Q8IU68 726 aa22.12■■□□□ 1.13
HSPG2-205ENST00000427897 SCN4BQ8IWT1 228 aa22.12■■□□□ 1.13
HSPG2-205ENST00000427897 PARD3BQ8TEW8 1205 aa22.12■■□□□ 1.13
HSPG2-205ENST00000427897 ZNF516Q92618 1163 aa22.12■■□□□ 1.13
HSPG2-205ENST00000427897 IPO9Q96P70 1041 aaKnown RBP22.12■■□□□ 1.13
HSPG2-205ENST00000427897 SYT15Q9BQS2 421 aa22.12■■□□□ 1.13
HSPG2-205ENST00000427897 DMAC2Q9NW81 257 aa22.12■■□□□ 1.13
HSPG2-205ENST00000427897 SIT1Q9Y3P8 196 aa22.12■■□□□ 1.13
HSPG2-205ENST00000427897 GALR2O43603 387 aaPredicted RBP22.11■■□□□ 1.13
HSPG2-205ENST00000427897 PI15O43692 258 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 MOSPD3O75425 235 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 SMC2O95347 1197 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 CSH1P0DML2 217 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 CSH2P0DML3 217 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 KRT13P13646 458 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 ATF6P18850 670 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 WARSP23381 471 aaKnown RBP22.11■■□□□ 1.13
HSPG2-205ENST00000427897 CYP2F1P24903 491 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 MYL6P60660 151 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 CYP27A1Q02318 531 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 NHLH1Q02575 133 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 PRKCQQ04759 706 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 MLF2Q15773 248 aaPredicted RBP22.11■■□□□ 1.13
HSPG2-205ENST00000427897 CWF19L1Q69YN2 538 aaKnown RBP22.11■■□□□ 1.13
HSPG2-205ENST00000427897 PHLDB3Q6NSJ2 640 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 LRRC3Q9BY71 257 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 ZNF334Q9HCZ1 680 aaPredicted RBP22.11■■□□□ 1.13
HSPG2-205ENST00000427897 ABCB6Q9NP58 842 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 TRAF3IP3Q9Y228 551 aa22.11■■□□□ 1.13
HSPG2-205ENST00000427897 LRRIQ3A6PVS8 624 aaPredicted RBP22.1■■□□□ 1.13
HSPG2-205ENST00000427897 ZNF263O14978 683 aa22.1■■□□□ 1.13
HSPG2-205ENST00000427897 PSMC3P17980 439 aa22.1■■□□□ 1.13
HSPG2-205ENST00000427897 NR2F2P24468 414 aa22.1■■□□□ 1.13
HSPG2-205ENST00000427897 GDI1P31150 447 aa22.1■■□□□ 1.13
HSPG2-205ENST00000427897 VIPR2P41587 438 aa22.1■■□□□ 1.13
HSPG2-205ENST00000427897 PSMC1P62191 440 aaKnown RBP22.1■■□□□ 1.13
HSPG2-205ENST00000427897 PNOCQ13519 176 aa22.1■■□□□ 1.13
HSPG2-205ENST00000427897 DDR2Q16832 855 aa22.1■■□□□ 1.13
HSPG2-205ENST00000427897 ZNF699Q32M78 642 aa22.1■■□□□ 1.13
HSPG2-205ENST00000427897 ZNF667Q5HYK9 610 aa22.1■■□□□ 1.13
HSPG2-205ENST00000427897 FMR1NBQ8N0W7 255 aaPredicted RBP22.1■■□□□ 1.13
HSPG2-205ENST00000427897 GUF1Q8N442 669 aaKnown RBP22.1■■□□□ 1.13
HSPG2-205ENST00000427897 DEPDC1BQ8WUY9 529 aa22.1■■□□□ 1.13
HSPG2-205ENST00000427897 ATOH1Q92858 354 aaPredicted RBP22.1■■□□□ 1.13
HSPG2-205ENST00000427897 IRF7Q92985 503 aa22.1■■□□□ 1.13
HSPG2-205ENST00000427897 UXTQ9UBK9 157 aaPredicted RBP22.1■■□□□ 1.13
HSPG2-205ENST00000427897 MYBPHLA2RUH7 354 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 H0Y858 1186 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 ATP2C2O75185 946 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 FAM163BP0C2L3 166 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 P4HA1P13674 534 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 LMO2P25791 158 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 ANXA13P27216 316 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 FAM160A1Q05DH4 1040 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 ADAM9Q13443 819 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 NCOA4Q13772 614 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 UBXN2BQ14CS0 331 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 VITQ6UXI7 678 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 GAREM2Q75VX8 874 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 GPIHBP1Q8IV16 184 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 ARID3BQ8IVW6 561 aaPredicted RBP22.09■■□□□ 1.13
HSPG2-205ENST00000427897 TMC2Q8TDI7 906 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 KBTBD7Q8WVZ9 684 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 SMARCE1Q969G3 411 aa22.09■■□□□ 1.13
HSPG2-205ENST00000427897 FUBP3Q96I24 572 aaKnown RBP eCLIP22.09■■□□□ 1.13
HSPG2-205ENST00000427897 MRPL45Q9BRJ2 306 aaKnown RBP22.09■■□□□ 1.13
HSPG2-205ENST00000427897 HEPACAM2A8MVW5 462 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 A8MXQ7 604 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 HCRTO43612 131 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 TACC1O75410 805 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 FCARP24071 287 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 PSMC2P35998 433 aaKnown RBP22.08■■□□□ 1.13
HSPG2-205ENST00000427897 GRIK1P39086 918 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 GPR15P49685 360 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 VAMP7P51809 220 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 STARD6P59095 220 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 CYP4F8P98187 520 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 SGSM1Q2NKQ1 1148 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 STXBP5Q5T5C0 1151 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 SDHAF4Q5VUM1 108 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 TDRD10Q5VZ19 366 aaKnown RBP22.08■■□□□ 1.13
HSPG2-205ENST00000427897 POTEHQ6S545 545 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 MFSD6LQ8IWD5 586 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 PLEKHO2Q8TD55 490 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 CSGALNACT1Q8TDX6 532 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 TMEM174Q8WUU8 243 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 MRPS31Q92665 395 aaKnown RBP22.08■■□□□ 1.13
HSPG2-205ENST00000427897 TASP1Q9H6P5 420 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 TRPV4Q9HBA0 871 aa22.08■■□□□ 1.13
HSPG2-205ENST00000427897 KANSL1LA0AUZ9 987 aa22.07■■□□□ 1.12
HSPG2-205ENST00000427897 NRG2O14511 850 aaPredicted RBP22.07■■□□□ 1.12
HSPG2-205ENST00000427897 STAU1O95793 577 aaKnown RBP22.07■■□□□ 1.12
HSPG2-205ENST00000427897 C4BPAP04003 597 aaKnown RBP22.07■■□□□ 1.12
HSPG2-205ENST00000427897 DCNP07585 359 aaKnown RBP22.07■■□□□ 1.12
HSPG2-205ENST00000427897 DLG4P78352 724 aa22.07■■□□□ 1.12
HSPG2-205ENST00000427897 TCF15Q12870 199 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms