RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 C6orf222P0C671 652 aaPredicted RBP5.89□□□□□ -1.47
SFXN1-202ENST00000421887 PABPC1P11940 636 aaKnown RBP5.89□□□□□ -1.47
SFXN1-202ENST00000421887 ACTN1P12814 892 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 NR4A1P22736 598 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 ATP2B3Q16720 1220 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 KRT40Q6A162 431 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 RD3Q7Z3Z2 195 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 ELOA2Q8IYF1 753 aaPredicted RBP5.89□□□□□ -1.47
SFXN1-202ENST00000421887 TEX11Q8IYF3 940 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 ABRAQ8N0Z2 381 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 BEND2Q8NDZ0 799 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 KLHDC4Q8TBB5 520 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 THAP3Q8WTV1 239 aaPredicted RBP5.89□□□□□ -1.47
SFXN1-202ENST00000421887 MOV10L1Q9BXT6 1211 aaKnown RBP5.89□□□□□ -1.47
SFXN1-202ENST00000421887 SPATC1LQ9H0A9 340 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 SLC6A15Q9H2J7 730 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 HIPK3Q9H422 1215 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 RBM8AQ9Y5S9 174 aaKnown RBP5.89□□□□□ -1.47
SFXN1-202ENST00000421887 ZDBF2Q9HCK1 2354 aa5.89□□□□□ -1.47
SFXN1-202ENST00000421887 COL4A3Q01955 1670 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 EYA2O00167 538 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 ARVCFO00192 962 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 BAG3O95817 575 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 ASGR1P07306 291 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 PFKMP08237 780 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 NBPF7P0C2Y1 421 aaPredicted RBP5.88□□□□□ -1.47
SFXN1-202ENST00000421887 PYGMP11217 842 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 IL9P15248 144 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 ATF4P18848 351 aaPredicted RBP5.88□□□□□ -1.47
SFXN1-202ENST00000421887 VCAM1P19320 739 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 KCNA5P22460 613 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 CCL23P55773 120 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 JAM2P57087 298 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 RHBDL3P58872 404 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 BPIFB4P59827 614 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 MECOMQ03112 1051 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 IFRD2Q12894 506 aaPredicted RBP5.88□□□□□ -1.47
SFXN1-202ENST00000421887 KCTD2Q14681 263 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 COG2Q14746 738 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 RABL6Q3YEC7 729 aaPredicted RBP5.88□□□□□ -1.47
SFXN1-202ENST00000421887 LEXMQ3ZCV2 418 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 LRRC55Q6ZSA7 311 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 MTDHQ86UE4 582 aaKnown RBP5.88□□□□□ -1.47
SFXN1-202ENST00000421887 SUGP1Q8IWZ8 645 aaKnown RBP5.88□□□□□ -1.47
SFXN1-202ENST00000421887 GCDHQ92947 438 aaPredicted RBP5.88□□□□□ -1.47
SFXN1-202ENST00000421887 LPPQ93052 612 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 OSBP2Q969R2 916 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 C12orf42Q96LP6 360 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 GPHA2Q96T91 129 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 TCF25Q9BQ70 676 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 TINF2Q9BSI4 451 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 TANGO6Q9C0B7 1094 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 RPAP3Q9H6T3 665 aaPredicted RBP5.88□□□□□ -1.47
SFXN1-202ENST00000421887 CCSER2Q9H7U1 834 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 UBE2ZQ9H832 354 aaPredicted RBP5.88□□□□□ -1.47
SFXN1-202ENST00000421887 CABP5Q9NP86 173 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 RAI14Q9P0K7 980 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 PRKAG3Q9UGI9 489 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 SYNRGQ9UMZ2 1314 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 ZNF318Q5VUA4 2279 aa5.88□□□□□ -1.47
SFXN1-202ENST00000421887 H2AFYO75367 372 aaKnown RBP5.87□□□□□ -1.47
SFXN1-202ENST00000421887 GH2P01242 217 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 FGFR1P11362 822 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 PHKA1P46020 1223 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 TIGD2Q4W5G0 525 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 FKBP15Q5T1M5 1219 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 KLHDC10Q6PID8 442 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 HIPK4Q8NE63 616 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 ATOH1Q92858 354 aaPredicted RBP5.87□□□□□ -1.47
SFXN1-202ENST00000421887 FBXW5Q969U6 566 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 SLC7A6OSQ96CW6 309 aaPredicted RBP5.87□□□□□ -1.47
SFXN1-202ENST00000421887 KAZALD1Q96I82 304 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 RSAD1Q9HA92 442 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 MAGEL2Q9UJ55 1249 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 VWA7Q9Y334 891 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 ROBO3Q96MS0 1386 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 COL4A4P53420 1690 aaPredicted RBP5.87□□□□□ -1.47
SFXN1-202ENST00000421887 SIPA1L1O43166 1804 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 FOCADQ5VW36 1801 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 MYH1P12882 1939 aa5.87□□□□□ -1.47
SFXN1-202ENST00000421887 REV3LO60673 3130 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 BRWD1Q9NSI6 2320 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 COL11A1P12107 1806 aaPredicted RBP5.86□□□□□ -1.47
SFXN1-202ENST00000421887 PDS5AQ29RF7 1337 aaKnown RBP5.86□□□□□ -1.47
SFXN1-202ENST00000421887 EPOPA6NHQ4 379 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 MFAP3LO75121 409 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 DUSP11O75319 330 aaKnown RBP5.86□□□□□ -1.47
SFXN1-202ENST00000421887 SLC25A27O95847 323 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 ETFBP38117 255 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 ID4P47928 161 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 CLK3P49761 638 aaKnown RBP5.86□□□□□ -1.47
SFXN1-202ENST00000421887 CDK7P50613 346 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 TAP1Q03518 808 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 RASGRF1Q13972 1273 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 DPH6Q7L8W6 267 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 MAPKAPK5Q8IW41 473 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 KLHDC9Q8NEP7 349 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.86□□□□□ -1.47
SFXN1-202ENST00000421887 PHOSPHO2Q8TCD6 241 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 CPT1CQ8TCG5 803 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms