RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 MAP4K3Q8IVH8 894 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 PYROXD1Q8WU10 500 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 IDI2Q9BXS1 227 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 DBNDD1Q9H9R9 158 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 EXOC7Q9UPT5 735 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 IVNS1ABPQ9Y6Y0 642 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 MAGEA13PA6NCF6 341 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 GSTA2P09210 222 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 VCPP55072 806 aaKnown RBP22.35■■□□□ 1.17
USP48-205ENST00000421625 PLEKHA7Q6IQ23 1121 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 DRICH1Q6PGQ1 229 aaPredicted RBP22.35■■□□□ 1.17
USP48-205ENST00000421625 C3orf62Q6ZUJ4 267 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 ENOSF1Q7L5Y1 443 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 ZNF677Q86XU0 584 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 RCOR2Q8IZ40 523 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 ZNF526Q8TF50 670 aaPredicted RBP22.35■■□□□ 1.17
USP48-205ENST00000421625 TUBB6Q9BUF5 446 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 VPS11Q9H270 941 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 PPCSQ9HAB8 311 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 MRPL47Q9HD33 250 aaKnown RBP22.35■■□□□ 1.17
USP48-205ENST00000421625 ARHGEF4Q9NR80 690 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 DNAJC6O75061 913 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 DCAKDQ8WVC6 231 aa22.35■■□□□ 1.17
USP48-205ENST00000421625 ZNF184Q99676 751 aaPredicted RBP22.35■■□□□ 1.17
USP48-205ENST00000421625 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.35■■□□□ 1.17
USP48-205ENST00000421625 LRRC37AA6NMS7 1700 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 TM9SF1O15321 606 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 DLDP09622 509 aaKnown RBP22.34■■□□□ 1.17
USP48-205ENST00000421625 RARBP10826 455 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 SERPINB4P48594 390 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 ARL4CP56559 192 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 CCDC62Q6P9F0 684 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 SPOCD1Q6ZMY3 1216 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 FBXO27Q8NI29 283 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 FBXL18Q96ME1 805 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 FAM213AQ9BRX8 229 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 TIPINQ9BVW5 301 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 PCMTD2Q9NV79 361 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 MRPL11Q9Y3B7 192 aaKnown RBP22.34■■□□□ 1.17
USP48-205ENST00000421625 ASTN2O75129 1339 aaPredicted RBP22.34■■□□□ 1.17
USP48-205ENST00000421625 NFASCO94856 1347 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 BGNP21810 368 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 GTF2H1P32780 548 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 PGM1P36871 562 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 ZRSR2Q15696 482 aaKnown RBP22.34■■□□□ 1.17
USP48-205ENST00000421625 RHPN2Q8IUC4 686 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 BSNDQ8WZ55 320 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 RBM41Q96IZ5 413 aaKnown RBP22.34■■□□□ 1.17
USP48-205ENST00000421625 DHRS4Q9BTZ2 278 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 SAE1Q9UBE0 346 aaPredicted RBP22.34■■□□□ 1.17
USP48-205ENST00000421625 ZNF212Q9UDV6 495 aa22.34■■□□□ 1.17
USP48-205ENST00000421625 FCHO1O14526 889 aa22.33■■□□□ 1.17
USP48-205ENST00000421625 TRAF1Q13077 416 aa22.33■■□□□ 1.17
USP48-205ENST00000421625 ALYREFQ86V81 257 aaKnown RBP22.33■■□□□ 1.17
USP48-205ENST00000421625 FEZF2Q8TBJ5 459 aa22.33■■□□□ 1.17
USP48-205ENST00000421625 TTC17Q96AE7 1141 aa22.33■■□□□ 1.17
USP48-205ENST00000421625 FAM161BQ96MY7 647 aa22.33■■□□□ 1.17
USP48-205ENST00000421625 NMUR2Q9GZQ4 415 aa22.33■■□□□ 1.17
USP48-205ENST00000421625 RANBP17Q9H2T7 1088 aaKnown RBP22.33■■□□□ 1.17
USP48-205ENST00000421625 COL20A1Q9P218 1284 aa22.33■■□□□ 1.17
USP48-205ENST00000421625 MTO1Q9Y2Z2 717 aaKnown RBP22.33■■□□□ 1.17
USP48-205ENST00000421625 RNF8O76064 485 aa22.33■■□□□ 1.16
USP48-205ENST00000421625 ZCCHC18P0CG32 403 aa22.33■■□□□ 1.16
USP48-205ENST00000421625 MYL2P10916 166 aa22.33■■□□□ 1.16
USP48-205ENST00000421625 ZNF252P-AS1Q0IIN9 211 aa22.33■■□□□ 1.16
USP48-205ENST00000421625 ZYXQ15942 572 aaKnown RBP22.33■■□□□ 1.16
USP48-205ENST00000421625 XKR9Q5GH70 373 aa22.33■■□□□ 1.16
USP48-205ENST00000421625 ATP11CQ8NB49 1132 aa22.33■■□□□ 1.16
USP48-205ENST00000421625 FAM111AQ96PZ2 611 aa22.33■■□□□ 1.16
USP48-205ENST00000421625 SENP7Q9BQF6 1050 aa22.33■■□□□ 1.16
USP48-205ENST00000421625 ACSS3Q9H6R3 686 aa22.33■■□□□ 1.16
USP48-205ENST00000421625 PCDH9Q9HC56 1237 aa22.33■■□□□ 1.16
USP48-205ENST00000421625 DRG1Q9Y295 367 aaKnown RBP22.33■■□□□ 1.16
USP48-205ENST00000421625 FARP1Q9Y4F1 1045 aaPredicted RBP22.33■■□□□ 1.16
USP48-205ENST00000421625 F8VP50 259 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 GDF10P55107 478 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 PRKD1Q15139 912 aaPredicted RBP22.32■■□□□ 1.16
USP48-205ENST00000421625 ABRAQ8N0Z2 381 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 FBXO36Q8NEA4 188 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 OXNAD1Q96HP4 312 aaPredicted RBP22.32■■□□□ 1.16
USP48-205ENST00000421625 MMADHCQ9H3L0 296 aaPredicted RBP22.32■■□□□ 1.16
USP48-205ENST00000421625 FAM237BA0A1B0GVD1 139 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 E5RJQ4 531 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 LPXNO60711 386 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 NPR1P16066 1061 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 PHBP35232 272 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 WNT7BP56706 349 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 KRT72Q14CN4 511 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 NBPF20Q3BBV1 942 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 TMEM270Q6UE05 265 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 SCINQ9Y6U3 715 aa22.32■■□□□ 1.16
USP48-205ENST00000421625 ACO1P21399 889 aaKnown RBP22.31■■□□□ 1.16
USP48-205ENST00000421625 GNA15P30679 374 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 LDHDQ86WU2 507 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.31■■□□□ 1.16
USP48-205ENST00000421625 CPT1BQ92523 772 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 SERAC1Q96JX3 654 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 GBP5Q96PP8 586 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 GORASP1Q9BQQ3 440 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 KMT5AQ9NQR1 393 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms