RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PHF13Q86YI8 300 aaPredicted RBP29.18■■■□□ 2.26
CPNE1-203ENST00000397442 MCOLN2Q8IZK6 566 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 B3GALNT2Q8NCR0 500 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 TMEM35BQ8NCS4 154 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 CTNNBL1Q8WYA6 563 aaPredicted RBP29.18■■■□□ 2.26
CPNE1-203ENST00000397442 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.18■■■□□ 2.264e-13■■■■■ 56.2
CPNE1-203ENST00000397442 COLEC11Q9BWP8 271 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 ZNF518BQ9C0D4 1074 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 CYTH4Q9UIA0 394 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 NCANO14594 1321 aa29.17■■■□□ 2.26
CPNE1-203ENST00000397442 KIF5CO60282 957 aa29.17■■■□□ 2.26
CPNE1-203ENST00000397442 TADA2AO75478 443 aa29.17■■■□□ 2.26
CPNE1-203ENST00000397442 BCAR1P56945 870 aa29.17■■■□□ 2.26
CPNE1-203ENST00000397442 PTP4A2Q12974 167 aa29.17■■■□□ 2.26
CPNE1-203ENST00000397442 STILQ15468 1287 aa29.17■■■□□ 2.26
CPNE1-203ENST00000397442 CCDC142Q17RM4 750 aa29.17■■■□□ 2.26
CPNE1-203ENST00000397442 PKDCCQ504Y2 493 aa29.17■■■□□ 2.26
CPNE1-203ENST00000397442 TMEM173Q86WV6 379 aaPredicted RBP29.17■■■□□ 2.26
CPNE1-203ENST00000397442 WDR24Q96S15 920 aa29.17■■■□□ 2.26
CPNE1-203ENST00000397442 ZMYND8Q9ULU4 1186 aaPredicted RBP29.17■■■□□ 2.26
CPNE1-203ENST00000397442 A0A0A6YYK5 440 aaPredicted RBP29.16■■■□□ 2.26
CPNE1-203ENST00000397442 PTPN1P18031 435 aaKnown RBP29.16■■■□□ 2.26
CPNE1-203ENST00000397442 GNG11P61952 73 aa29.16■■■□□ 2.26
CPNE1-203ENST00000397442 SECISBP2LQ93073 1101 aaKnown RBP29.16■■■□□ 2.26
CPNE1-203ENST00000397442 CRTAC1Q9NQ79 661 aa29.16■■■□□ 2.26
CPNE1-203ENST00000397442 CXXC1Q9P0U4 656 aaPredicted RBP29.16■■■□□ 2.26
CPNE1-203ENST00000397442 VWA8A3KMH1 1905 aa29.16■■■□□ 2.26
CPNE1-203ENST00000397442 ARHGEF37A1IGU5 675 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 NT5C1B-RDH14C9J2C7 533 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 M0QYV0 167 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 MOCS3O95396 460 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 CCDC130P13994 396 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 MMP8P22894 467 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 GPD2P43304 727 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 GPC5P78333 572 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 GOLGA7BQ2TAP0 167 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 TTC30AQ86WT1 665 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 METTL23Q86XA0 190 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 RNF10Q8N5U6 811 aaKnown RBP29.15■■■□□ 2.26
CPNE1-203ENST00000397442 BCL7CQ8WUZ0 217 aaPredicted RBP29.15■■■□□ 2.26
CPNE1-203ENST00000397442 GPR62Q9BZJ7 368 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 MYO1AQ9UBC5 1043 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 CAPN6Q9Y6Q1 641 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 ZBBXA8MT70 800 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 KIF2AO00139 706 aaPredicted RBP29.15■■■□□ 2.26
CPNE1-203ENST00000397442 TRAPPC3O43617 180 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 BUB1O43683 1085 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 TKTP29401 623 aaKnown RBP29.15■■■□□ 2.26
CPNE1-203ENST00000397442 C2CD6Q53TS8 623 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 ZNF569Q5MCW4 686 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 OVOS1Q6IE37 1185 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 PSRC1Q6PGN9 363 aaPredicted RBP29.15■■■□□ 2.26
CPNE1-203ENST00000397442 SYT10Q6XYQ8 523 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 CMTR2Q8IYT2 770 aaKnown RBP29.15■■■□□ 2.26
CPNE1-203ENST00000397442 UBA3Q8TBC4 463 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 RFFLQ8WZ73 363 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 SYT15Q9BQS2 421 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 DNAI2Q9GZS0 605 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 GTF3C4Q9UKN8 822 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 CDH9Q9ULB4 789 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 CEP83Q9Y592 693 aa29.15■■■□□ 2.26
CPNE1-203ENST00000397442 ATMINO43313 823 aaPredicted RBP29.14■■■□□ 2.26
CPNE1-203ENST00000397442 CYP1A2P05177 515 aa29.14■■■□□ 2.26
CPNE1-203ENST00000397442 PPP1R2P3Q6NXS1 205 aa29.14■■■□□ 2.26
CPNE1-203ENST00000397442 MMS22LQ6ZRQ5 1243 aa29.14■■■□□ 2.26
CPNE1-203ENST00000397442 ZNF653Q96CK0 615 aa29.14■■■□□ 2.26
CPNE1-203ENST00000397442 VCPIP1Q96JH7 1222 aa29.14■■■□□ 2.26
CPNE1-203ENST00000397442 ACBD6Q9BR61 282 aa29.14■■■□□ 2.26
CPNE1-203ENST00000397442 C11orf70Q9BRQ4 267 aa29.14■■■□□ 2.26
CPNE1-203ENST00000397442 TUBB4AP04350 444 aa29.13■■■□□ 2.25
CPNE1-203ENST00000397442 PCSK1P29120 753 aa29.13■■■□□ 2.25
CPNE1-203ENST00000397442 C1QBPQ07021 282 aaKnown RBP29.13■■■□□ 2.25
CPNE1-203ENST00000397442 TCEAL1Q15170 157 aa29.13■■■□□ 2.25
CPNE1-203ENST00000397442 SLC35F6Q8N357 371 aa29.13■■■□□ 2.25
CPNE1-203ENST00000397442 SLC35G2Q8TBE7 412 aa29.13■■■□□ 2.25
CPNE1-203ENST00000397442 ADAM22Q9P0K1 906 aa29.13■■■□□ 2.25
CPNE1-203ENST00000397442 MYH10P35580 1976 aa29.13■■■□□ 2.25
CPNE1-203ENST00000397442 SYN3O14994 580 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 EFEMP2O95967 443 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 FUT10Q6P4F1 479 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 PAQR9Q6ZVX9 377 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 FUKQ8N0W3 1084 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 OR10T2Q8NGX3 314 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 SLC2A14Q8TDB8 520 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 HERVK_113Q902F9 699 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 NOX5Q96PH1 765 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 PKMYT1Q99640 499 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 HNRNPABQ99729 332 aaKnown RBP29.12■■■□□ 2.25
CPNE1-203ENST00000397442 OSGEPQ9NPF4 335 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 CHORDC1Q9UHD1 332 aaPredicted RBP29.12■■■□□ 2.25
CPNE1-203ENST00000397442 COG5Q9UP83 839 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 MYBPHLA2RUH7 354 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 OAZ2O95190 189 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 GJB5O95377 273 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 RRM1P23921 792 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 ALDH7A1P49419 539 aaKnown RBP29.12■■■□□ 2.25
CPNE1-203ENST00000397442 YWHAHQ04917 246 aaPredicted RBP29.12■■■□□ 2.25
CPNE1-203ENST00000397442 BTG3Q14201 252 aaPredicted RBP29.12■■■□□ 2.25
CPNE1-203ENST00000397442 PTPN20Q4JDL3 420 aa29.12■■■□□ 2.25
CPNE1-203ENST00000397442 MDH1BQ5I0G3 518 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms