RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 NCCRP1Q6ZVX7 275 aaPredicted RBP15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 DHDDSQ86SQ9 333 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 ZNF713Q8N859 430 aaPredicted RBP15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 MTBPQ96DY7 904 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 C12orf65Q9H3J6 166 aaKnown RBP15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 SLC24A2Q9UI40 661 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 MYO3BQ8WXR4 1341 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 TRIM49P0CI25 452 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 TRIM49CP0CI26 452 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 ADSSP30520 456 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 STAT3P40763 770 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 AQP4P55087 323 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 SEPT7Q16181 437 aaKnown RBP15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 SLC44A4Q53GD3 710 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 ZBED8Q8IZ13 594 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 LMO3Q8TAP4 145 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 TCP10LQ8TDR4 215 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 KLHL4Q9C0H6 718 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 RBM38Q9H0Z9 239 aaKnown RBP15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 ALG13Q9NP73 1137 aaKnown RBP15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 ARHGEF38Q9NXL2 777 aa15.39■□□□□ 0.05
VPS9D1-201ENST00000389386 IGKV6D-41A0A0C4DH26 115 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 PIK3CDO00329 1044 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 EML1O00423 815 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 HLA-DOAP06340 250 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 GZMAP12544 262 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 XIAPP98170 497 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 FASTKD3Q14CZ7 662 aaKnown RBP15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 MMEL1Q495T6 779 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 ANKRD20A4Q4UJ75 823 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 LPCAT4Q643R3 524 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 SH3BP5LQ7L8J4 393 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 SLC25A41Q8N5S1 370 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 TDRD3Q9H7E2 651 aaKnown RBP15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 C17orf75Q9HAS0 396 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 PSMC3IPQ9P2W1 217 aaPredicted RBP15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 USP17L15C9J2P7 530 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 USP17L13C9JLJ4 530 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 USP17L11C9JVI0 530 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 USP17L18D6R9N7 530 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 USP17L22D6RA61 530 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 USP17L17D6RBQ6 530 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 USP17L19D6RCP7 530 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 USP17L20D6RJB6 530 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 ENO1P06733 434 aaKnown RBP15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 MYL2P10916 166 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 ZNF24P17028 368 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 NOVP48745 357 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 SERPINB8P50452 374 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 RPL26P61254 145 aaKnown RBP15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 MYL7Q01449 175 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 USP17L24Q0WX57 530 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 HP1BP3Q5SSJ5 553 aaPredicted RBP15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 USP17L6PQ6QN14 398 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 KYAT3Q6YP21 454 aaKnown RBP15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 ALDH16A1Q8IZ83 802 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 UBE2TQ9NPD8 197 aaPredicted RBP15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 INIPQ9NRY2 104 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 SLC17A7Q9P2U7 560 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 FAM198AQ9UFP1 575 aa15.38■□□□□ 0.05
VPS9D1-201ENST00000389386 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 SPDYE16A6NNV3 312 aaPredicted RBP15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 YDJCA8MPS7 323 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 F5H6K3 240 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 RAD17O75943 681 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 IDO1P14902 403 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 RFX1P22670 979 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 KLRC2P26717 231 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 CENPCQ03188 943 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 PRKD1Q15139 912 aaPredicted RBP15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 ASPRV1Q53RT3 343 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 MAP3K21Q5TCX8 1036 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 KLHL35Q6PF15 583 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 NSMFQ6X4W1 530 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 ALYREFQ86V81 257 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 CATSPER3Q86XQ3 398 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 ZFP28Q8NHY6 868 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 RSPH1Q8WYR4 309 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 MKNK1Q9BUB5 465 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 VPS37BQ9H9H4 285 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 ADAMTS6Q9UKP5 1117 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 TELO2Q9Y4R8 837 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 MEIS1O00470 390 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 TM9SF1O15321 606 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 EEF2P13639 858 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 CLK2P49760 499 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 NADK2Q4G0N4 442 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 CAPN12Q6ZSI9 719 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 PODNQ7Z5L7 613 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 NLRX1Q86UT6 975 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 METTL25Q8N6Q8 603 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 ARL10Q8N8L6 244 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 NAP1L4Q99733 375 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 SIKE1Q9BRV8 207 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 OXCT2Q9BYC2 517 aaPredicted RBP15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 PPCSQ9HAB8 311 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 ACP6Q9NPH0 428 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 TBCCD1Q9NVR7 557 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 PIM2Q9P1W9 311 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 UVRAGQ9P2Y5 699 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms