RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 SIGLEC16A6NMB1 481 aa22.72■■□□□ 1.23
GMDS-202ENST00000380815 ZNF623O75123 536 aa22.72■■□□□ 1.23
GMDS-202ENST00000380815 GHRP10912 638 aa22.72■■□□□ 1.23
GMDS-202ENST00000380815 GRK4P32298 578 aa22.72■■□□□ 1.23
GMDS-202ENST00000380815 PDCLQ13371 301 aa22.72■■□□□ 1.23
GMDS-202ENST00000380815 ZNF268Q14587 947 aaPredicted RBP22.72■■□□□ 1.23
GMDS-202ENST00000380815 RHOT1Q8IXI2 618 aa22.72■■□□□ 1.23
GMDS-202ENST00000380815 OR6B3Q8NGW1 331 aa22.72■■□□□ 1.23
GMDS-202ENST00000380815 OSBPL7Q9BZF2 842 aa22.72■■□□□ 1.23
GMDS-202ENST00000380815 SYNCQ9H7C4 482 aa22.72■■□□□ 1.23
GMDS-202ENST00000380815 FAM53CQ9NYF3 392 aa22.72■■□□□ 1.23
GMDS-202ENST00000380815 NR2E1Q9Y466 385 aa22.72■■□□□ 1.23
GMDS-202ENST00000380815 MEIS3P2A8K0S8 358 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 LILRA4P59901 499 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 PSMC1P62191 440 aaKnown RBP22.71■■□□□ 1.23
GMDS-202ENST00000380815 DSC3Q14574 896 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 DPH6Q7L8W6 267 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 HDXQ7Z353 690 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 ACOT1Q86TX2 421 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 C12orf29Q8N999 325 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 APPL2Q8NEU8 664 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 CCDC26Q8TAB7 109 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 KBTBD7Q8WVZ9 684 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 DDX27Q96GQ7 796 aaKnown RBP22.71■■□□□ 1.23
GMDS-202ENST00000380815 NME7Q9Y5B8 376 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 ERBB2P04626 1255 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 MYBL2P10244 700 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 MLH1P40692 756 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 PIGHQ14442 188 aaPredicted RBP22.71■■□□□ 1.23
GMDS-202ENST00000380815 MAATS1Q7Z4T9 603 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 XYLT1Q86Y38 959 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 SLC13A5Q86YT5 568 aaPredicted RBP22.71■■□□□ 1.23
GMDS-202ENST00000380815 NIPA2Q8N8Q9 360 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 SLC43A3Q8NBI5 491 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 GAD1Q99259 594 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 DNAI2Q9GZS0 605 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 MIS12Q9H081 205 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 OGFRQ9NZT2 677 aa22.71■■□□□ 1.23
GMDS-202ENST00000380815 DNAH12Q6ZR08 3092 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 A8MXQ7 604 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 MAP2K7O14733 419 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 SASH3O75995 380 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 THP07101 528 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 KRT3P12035 628 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 GUCY2DQ02846 1103 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 ZNF252P-AS1Q0IIN9 211 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 PKDCCQ504Y2 493 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 ZNF618Q5T7W0 954 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 PPP1R26Q5T8A7 1209 aaPredicted RBP22.7■■□□□ 1.22
GMDS-202ENST00000380815 ARHGAP17Q68EM7 881 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 AGMOQ6ZNB7 445 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 CRYBG2Q8N1P7 616 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 TOP6BLQ8N6T0 577 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 UBA3Q8TBC4 463 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 FNIP1Q8TF40 1166 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 HINFPQ9BQA5 517 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 TSPYL2Q9H2G4 693 aaPredicted RBP22.7■■□□□ 1.22
GMDS-202ENST00000380815 TJP2Q9UDY2 1190 aa22.7■■□□□ 1.22
GMDS-202ENST00000380815 A0A0U1RQF3 1178 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 A0A1W2PQ45 241 aaPredicted RBP22.69■■□□□ 1.22
GMDS-202ENST00000380815 A0A1W2PQY0 241 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 ARL5CA6NH57 179 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 HUS1O60921 280 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 FAM163BP0C2L3 166 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 GNL1P36915 607 aaPredicted RBP22.69■■□□□ 1.22
GMDS-202ENST00000380815 TAS2R40P59535 323 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 GOLGA7BQ2TAP0 167 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 ADAT2Q7Z6V5 191 aaKnown RBP22.69■■□□□ 1.22
GMDS-202ENST00000380815 KATNAL2Q8IYT4 538 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 IPO4Q8TEX9 1081 aaKnown RBP22.69■■□□□ 1.22
GMDS-202ENST00000380815 AENQ8WTP8 325 aaKnown RBP22.69■■□□□ 1.22
GMDS-202ENST00000380815 LPPQ93052 612 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 MCRS1Q96EZ8 462 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 EPB41L5Q9HCM4 733 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.69■■□□□ 1.224e-6■□□□□ 11.2
GMDS-202ENST00000380815 AMACRQ9UHK6 382 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 MTUS1Q9ULD2 1270 aa22.69■■□□□ 1.22
GMDS-202ENST00000380815 MGEA5O60502 916 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 PFKMP08237 780 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 SETSIPP0DME0 302 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 OGDHQ02218 1023 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 LRRC38Q5VT99 294 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 DAB2IPQ5VWQ8 1189 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 SNX25Q9H3E2 840 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 USTQ9Y2C2 406 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 GOLGA8SH3BPF8 625 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 FSCN2O14926 492 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 FGFR1P11362 822 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 RFC1P35251 1148 aaPredicted RBP22.68■■□□□ 1.22
GMDS-202ENST00000380815 HTRA3P83110 453 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 PRELID2Q8N945 189 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 STARD7Q9NQZ5 370 aa22.68■■□□□ 1.22
GMDS-202ENST00000380815 A0A0U1RQG5 324 aaPredicted RBP22.67■■□□□ 1.22
GMDS-202ENST00000380815 ZSCAN5CA6NGD5 496 aaPredicted RBP22.67■■□□□ 1.22
GMDS-202ENST00000380815 BHMG1C9JSJ3 638 aaPredicted RBP22.67■■□□□ 1.22
GMDS-202ENST00000380815 PHF2O75151 1096 aa22.67■■□□□ 1.22
GMDS-202ENST00000380815 CKBP12277 381 aa22.67■■□□□ 1.22
GMDS-202ENST00000380815 SKIP12755 728 aa22.67■■□□□ 1.22
GMDS-202ENST00000380815 WARSP23381 471 aaKnown RBP22.67■■□□□ 1.22
GMDS-202ENST00000380815 CHRNA3P32297 505 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms