RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 LMO2P25791 158 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 RPL13P26373 211 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 ANP32AP39687 249 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 PLA2G5P39877 138 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 AP3M2P53677 418 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 EPHA5P54756 1037 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 DLG4P78352 724 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 CYP4F8P98187 520 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 NCOA4Q13772 614 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 DDR2Q16832 855 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 STXBP5Q5T5C0 1151 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 GPR158Q5T848 1215 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 TDRD10Q5VZ19 366 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 CWF19L1Q69YN2 538 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 DPH6Q7L8W6 267 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 GUF1Q8N442 669 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 TMEM105Q8N8V8 129 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 PRSS33Q8NF86 280 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 SPATA18Q8TC71 538 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 PARD3BQ8TEW8 1205 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 KBTBD7Q8WVZ9 684 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 SMARCD2Q92925 531 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 SMARCE1Q969G3 411 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 MYLPFQ96A32 169 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 ELSPBP1Q96BH3 223 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 ELMO3Q96BJ8 720 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 ASB16Q96NS5 453 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 MRPL45Q9BRJ2 306 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 PLA2G2FQ9BZM2 168 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 GZF1Q9H116 711 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 TBC1D17Q9HA65 648 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.38□□□□□ -0.431e-6■■■■■ 127.5
SMARCE1-203ENST00000377808 SLC2A4RGQ9NR83 387 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 CDH9Q9ULB4 789 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 TRAF3IP3Q9Y228 551 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 A8MXQ7 604 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 DPYSL4O14531 572 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 GABRDO14764 452 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 KINO60870 393 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 TRIM49P0CI25 452 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 TRIM49CP0CI26 452 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 FCARP24071 287 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 CDC25CP30307 473 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 ATICP31939 592 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 GNL1P36915 607 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 VIPR2P41587 438 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 PIK3CAP42336 1068 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 RAP1GAPP47736 663 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 VAMP7P51809 220 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 RPL10AP62906 217 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 PFKPQ01813 784 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 ADAM9Q13443 819 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 ZNF667Q5HYK9 610 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 MDH1BQ5I0G3 518 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 C4orf50Q6ZRC1 276 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 YAF2Q8IY57 180 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 FAM186BQ8IYM0 893 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 PRRX2Q99811 253 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 TSG101Q99816 390 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 LRRC3Q9BY71 257 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 GPR88Q9GZN0 384 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 KCNH6Q9H252 994 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 BRD9Q9H8M2 597 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 MAGEC2Q9UBF1 373 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 CIZ1Q9ULV3 898 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 KMT2EQ8IZD2 1858 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 HEPACAM2A8MVW5 462 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 AKAP3O75969 853 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 C4BPAP04003 597 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 CSH1P0DML2 217 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 CSH2P0DML3 217 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 NPR3P17342 541 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 AOC1P19801 751 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 ANXA13P27216 316 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 GDI1P31150 447 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 PSMC2P35998 433 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 GRIK1P39086 918 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 CLCN5P51795 746 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 PTPN5P54829 565 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 MAPRE1Q15691 268 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 MLF2Q15773 248 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 ISM2Q6H9L7 571 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 INTS8Q75QN2 995 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 GAREM2Q75VX8 874 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 ENGASEQ8NFI3 743 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 EEF2KMTQ96G04 330 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 SHDQ96IW2 340 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 TRMT61BQ9BVS5 477 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 DPEP3Q9H4B8 488 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 SMYD3Q9H7B4 428 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 ABCB6Q9NP58 842 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 CRTAC1Q9NQ79 661 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 ARIH1Q9Y4X5 557 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 PCDHA5Q9Y5H7 936 aa12.37□□□□□ -0.43
SMARCE1-203ENST00000377808 CETN3O15182 167 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 PI15O43692 258 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 GADD45BO75293 160 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 TACC1O75410 805 aa12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 EPB41P11171 864 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-203ENST00000377808 P4HA1P13674 534 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms