RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TBC1D17Q9HA65 648 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 ZNF334Q9HCZ1 680 aaPredicted RBP18.02■□□□□ 0.48
HMGN4-201ENST00000377575 TMLHEQ9NVH6 421 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 HOOK1Q9UJC3 728 aaKnown RBP18.02■□□□□ 0.48
HMGN4-201ENST00000377575 CDH9Q9ULB4 789 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 ZNF638Q14966 1978 aaKnown RBP18.02■□□□□ 0.47
HMGN4-201ENST00000377575 LRRIQ3A6PVS8 624 aaPredicted RBP18.01■□□□□ 0.47
HMGN4-201ENST00000377575 MAPK13O15264 365 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 NR2F2P24468 414 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 GABRR2P28476 465 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 CDR1P51861 262 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 RPL10AP62906 217 aaKnown RBP18.01■□□□□ 0.47
HMGN4-201ENST00000377575 CLDN10P78369 228 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 PNOCQ13519 176 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 SNW1Q13573 536 aaKnown RBP18.01■□□□□ 0.47
HMGN4-201ENST00000377575 MAPRE1Q15691 268 aaKnown RBP18.01■□□□□ 0.47
HMGN4-201ENST00000377575 WDR72Q3MJ13 1102 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 TANGO2Q6ICL3 276 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 C4orf50Q6ZRC1 276 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 SPATA2LQ8IUW3 424 aaPredicted RBP18.01■□□□□ 0.47
HMGN4-201ENST00000377575 KBTBD7Q8WVZ9 684 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 ZNF516Q92618 1163 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 E2F7Q96AV8 911 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 ZSWIM3Q96MP5 696 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 PKMYT1Q99640 499 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 SNX25Q9H3E2 840 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 ATXN3LQ9H3M9 355 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 TRPV4Q9HBA0 871 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 GTF3C4Q9UKN8 822 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 CIZ1Q9ULV3 898 aaPredicted RBP18.01■□□□□ 0.47
HMGN4-201ENST00000377575 TICRRQ7Z2Z1 1910 aa18.01■□□□□ 0.47
HMGN4-201ENST00000377575 NRG2O14511 850 aaPredicted RBP18■□□□□ 0.47
HMGN4-201ENST00000377575 GALR2O43603 387 aaPredicted RBP18■□□□□ 0.47
HMGN4-201ENST00000377575 TACC1O75410 805 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 SMC2O95347 1197 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 CST3P01034 146 aaPredicted RBP18■□□□□ 0.47
HMGN4-201ENST00000377575 RPL13P26373 211 aaKnown RBP18■□□□□ 0.47
HMGN4-201ENST00000377575 MYL6P60660 151 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 ZNF699Q32M78 642 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 CFAP221Q4G0U5 840 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 TDRD10Q5VZ19 366 aaKnown RBP18■□□□□ 0.47
HMGN4-201ENST00000377575 PHLDB3Q6NSJ2 640 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 POTEHQ6S545 545 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 GAREM2Q75VX8 874 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 PLEKHO2Q8TD55 490 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 TMC2Q8TDI7 906 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 GIPC2Q8TF65 315 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 DEPDC1BQ8WUY9 529 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 IRF2BPLQ9H1B7 796 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 VRTNQ9H8Y1 702 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 ZMYM5Q9UJ78 669 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 MAPK8IP1Q9UQF2 711 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 COL4A2P08572 1712 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 GREB1Q4ZG55 1949 aa18■□□□□ 0.47
HMGN4-201ENST00000377575 HCRTO43612 131 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 FAM163BP0C2L3 166 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 CSH1P0DML2 217 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 CSH2P0DML3 217 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 PSMC3P17980 439 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 PSMC1P62191 440 aaKnown RBP17.99■□□□□ 0.47
HMGN4-201ENST00000377575 NHLH1Q02575 133 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 PRKCQQ04759 706 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 NCOA4Q13772 614 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 MLF2Q15773 248 aaPredicted RBP17.99■□□□□ 0.47
HMGN4-201ENST00000377575 FAM171BQ6P995 826 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 INTS8Q75QN2 995 aaKnown RBP17.99■□□□□ 0.47
HMGN4-201ENST00000377575 ENGASEQ8NFI3 743 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 DNASE1L2Q92874 299 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 TIGD1Q96MW7 591 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 GSDMAQ96QA5 445 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 TRMT61BQ9BVS5 477 aaKnown RBP17.99■□□□□ 0.47
HMGN4-201ENST00000377575 GTPBP4Q9BZE4 634 aaKnown RBP17.99■□□□□ 0.47
HMGN4-201ENST00000377575 PLA2G2FQ9BZM2 168 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 XYLT2Q9H1B5 865 aa17.99■□□□□ 0.47
HMGN4-201ENST00000377575 UXTQ9UBK9 157 aaPredicted RBP17.99■□□□□ 0.47
HMGN4-201ENST00000377575 NXF1Q9UBU9 619 aaKnown RBP17.99■□□□□ 0.47
HMGN4-201ENST00000377575 MYBPHLA2RUH7 354 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 IKBKBO14920 756 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 C4BPAP04003 597 aaKnown RBP17.98■□□□□ 0.47
HMGN4-201ENST00000377575 KRT13P13646 458 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 P4HA1P13674 534 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 CYP2F1P24903 491 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 LMO2P25791 158 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 GNL1P36915 607 aaPredicted RBP17.98■□□□□ 0.47
HMGN4-201ENST00000377575 MAGEA11P43364 429 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 STARD6P59095 220 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 TCF15Q12870 199 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 GRM2Q14416 872 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 EDRF1Q3B7T1 1238 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 SLC44A4Q53GD3 710 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 ZNF667Q5HYK9 610 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 STXBP5Q5T5C0 1151 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 GPR158Q5T848 1215 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 VITQ6UXI7 678 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 OR6B3Q8NGW1 331 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 IRF7Q92985 503 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 MYLPFQ96A32 169 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 MRPL45Q9BRJ2 306 aaKnown RBP17.98■□□□□ 0.47
HMGN4-201ENST00000377575 BRD9Q9H8M2 597 aa17.98■□□□□ 0.47
HMGN4-201ENST00000377575 MAGEC2Q9UBF1 373 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms