RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 P3H1Q32P28 736 aa21.71■■□□□ 1.07
VEGFA-204ENST00000372064 TTC31Q49AM3 519 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-204ENST00000372064 ZNF484Q5JVG2 852 aa21.71■■□□□ 1.07
VEGFA-204ENST00000372064 IFNLR1Q8IU57 520 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-204ENST00000372064 LINC01465Q8N7H1 131 aa21.71■■□□□ 1.07
VEGFA-204ENST00000372064 ZC3H15Q8WU90 426 aaKnown RBP21.71■■□□□ 1.07
VEGFA-204ENST00000372064 CPB2Q96IY4 423 aa21.71■■□□□ 1.07
VEGFA-204ENST00000372064 SIGLEC16A6NMB1 481 aa21.71■■□□□ 1.07
VEGFA-204ENST00000372064 POLR2BP30876 1174 aaKnown RBP21.71■■□□□ 1.07
VEGFA-204ENST00000372064 RAD23BP54727 409 aa21.71■■□□□ 1.07
VEGFA-204ENST00000372064 LAMC2Q13753 1193 aa21.71■■□□□ 1.07
VEGFA-204ENST00000372064 JADE1Q6IE81 842 aa21.71■■□□□ 1.07
VEGFA-204ENST00000372064 CEP128Q6ZU80 1094 aa21.71■■□□□ 1.07
VEGFA-204ENST00000372064 AKT3Q9Y243 479 aa21.71■■□□□ 1.07
VEGFA-204ENST00000372064 C3orf70A6NLC5 250 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-204ENST00000372064 GOLGA8SH3BPF8 625 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 VTNP04004 478 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 ITGB3P05106 788 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 ZNF286BP0CG31 522 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 OASLQ15646 514 aaKnown RBP21.7■■□□□ 1.06
VEGFA-204ENST00000372064 CCDC38Q502W7 563 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 MAMDC4Q6UXC1 1216 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 FNIP1Q8TF40 1166 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 AFG1LQ8WV93 481 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 ARHGEF2Q92974 986 aaKnown RBP21.7■■□□□ 1.06
VEGFA-204ENST00000372064 NKD2Q969F2 451 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-204ENST00000372064 SMYD3Q9H7B4 428 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 LGALS13Q9UHV8 139 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 DNALI1O14645 258 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-204ENST00000372064 MCF2P10911 925 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 ADORA2AP29274 412 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 GLIS1Q8NBF1 620 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 CABS1Q96KC9 395 aa21.7■■□□□ 1.06
VEGFA-204ENST00000372064 PRMT1Q99873 361 aaKnown RBP21.7■■□□□ 1.06
VEGFA-204ENST00000372064 ITGBL1O95965 494 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-204ENST00000372064 RFC1P35251 1148 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-204ENST00000372064 SLC25A11Q02978 314 aaKnown RBP21.69■■□□□ 1.06
VEGFA-204ENST00000372064 ZNF792Q3KQV3 632 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 LDLRAD1Q5T700 205 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 CHADLQ6NUI6 762 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 DPY19L2Q6NUT2 758 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 TWNKQ96RR1 684 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 PDZD7Q9H5P4 517 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 VRTNQ9H8Y1 702 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 HMGXB4Q9UGU5 601 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 ABHD2P08910 425 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 VCPP55072 806 aaKnown RBP21.69■■□□□ 1.06
VEGFA-204ENST00000372064 GPRC5AQ8NFJ5 357 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 ZNF148Q9UQR1 794 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 EFR3BQ9Y2G0 817 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 GH1P01241 217 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 ITGAVP06756 1048 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 KRT3P12035 628 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 TNFAIP2Q03169 654 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 RNF187Q5TA31 235 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-204ENST00000372064 ARFGAP1Q8N6T3 406 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 SLC4A11Q8NBS3 891 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 JOSD2Q8TAC2 188 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 L3MBTL3Q96JM7 780 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-204ENST00000372064 CTNNAL1Q9UBT7 734 aa21.69■■□□□ 1.06
VEGFA-204ENST00000372064 ADCYAP1R1P41586 468 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 CCDC142Q17RM4 750 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 VSTM1Q6UX27 236 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 PIGWQ7Z7B1 504 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 SLC10A4Q96EP9 437 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 RBM15Q96T37 977 aaKnown RBP eCLIP21.68■■□□□ 1.064e-9■■■□□ 15.9
VEGFA-204ENST00000372064 PNMA3Q9UL41 463 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 LRRD1A4D1F6 860 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 ARF4P18085 180 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-204ENST00000372064 PSMA2P25787 234 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 ATICP31939 592 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 STAT4Q14765 748 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 HAUS1Q96CS2 278 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 EURLQ9NYK6 297 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 WDR35Q9P2L0 1181 aa21.68■■□□□ 1.06
VEGFA-204ENST00000372064 MAGEB2O15479 319 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 CILPO75339 1184 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 LRCH4O75427 683 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 ARSEP51690 589 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 TAZQ16635 292 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 SLC10A6Q3KNW5 377 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 CCDC121Q6ZUS5 278 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 XYLT1Q86Y38 959 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 SLC35B2Q8TB61 432 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 KAT2BQ92831 832 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 CPXM1Q96SM3 734 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 OSBPL7Q9BZF2 842 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 ELOVL4Q9GZR5 314 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 ASB7Q9H672 318 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 MAGEA4P43358 317 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 ACTN3Q08043 901 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-204ENST00000372064 LRRC34Q8IZ02 419 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 PPTC7Q8NI37 304 aa21.67■■□□□ 1.06
VEGFA-204ENST00000372064 TPX2Q9ULW0 747 aaKnown RBP21.67■■□□□ 1.06
VEGFA-204ENST00000372064 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.66■■□□□ 1.06
VEGFA-204ENST00000372064 ZSCAN5DPP0CG00 497 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 CETPP11597 493 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 PSMC1P62191 440 aaKnown RBP21.66■■□□□ 1.06
VEGFA-204ENST00000372064 C16orf70Q9BSU1 422 aa21.66■■□□□ 1.06
VEGFA-204ENST00000372064 CYP3A43Q9HB55 503 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms