RNA–Protein interactions for RNA: ENST00000366873.6

CAPN8-202, Transcript of calpain 8, humanhuman

TSL 5 BASIC

Gene CAPN8, Length 2,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-202ENST00000366873 TRAPPC3O43617 180 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 ATP2C2O75185 946 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 FGF18O76093 207 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 RHOXF2BP0C7M4 288 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 ODC1P11926 461 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 TYMPP19971 482 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 FECHP22830 423 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 USP8P40818 1118 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 PLCB3Q01970 1234 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 TAP1Q03518 808 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 RSPO2Q6UXX9 243 aaPredicted RBP10.37□□□□□ -0.75
CAPN8-202ENST00000366873 TMEM86AQ8N2M4 240 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 RBBP8NLQ8NC74 664 aaPredicted RBP10.37□□□□□ -0.75
CAPN8-202ENST00000366873 OR6B3Q8NGW1 331 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 OR10T2Q8NGX3 314 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 TFAP2BQ92481 460 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 DDX1Q92499 740 aaKnown RBP10.37□□□□□ -0.75
CAPN8-202ENST00000366873 TMEM209Q96SK2 561 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 HINFPQ9BQA5 517 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 RHOXF2Q9BQY4 288 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 SYT11Q9BT88 431 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 FAM124BQ9H5Z6 455 aaPredicted RBP10.37□□□□□ -0.75
CAPN8-202ENST00000366873 UNC80Q8N2C7 3258 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 VWA8A3KMH1 1905 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 A8MXQ7 604 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 C5orf67F2Z3F1 127 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 SYN3O14994 580 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 TBC1D4O60343 1298 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 CFHP08603 1231 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 KRT5P13647 590 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 ACAT1P24752 427 aaKnown RBP10.37□□□□□ -0.75
CAPN8-202ENST00000366873 DNAJB1P25685 340 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 PRKCIP41743 596 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 CDR1P51861 262 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 CAMK1Q14012 370 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 VARS2Q5ST30 1063 aaKnown RBP10.37□□□□□ -0.75
CAPN8-202ENST00000366873 SFMBT2Q5VUG0 894 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 NOP9Q86U38 636 aaKnown RBP10.37□□□□□ -0.75
CAPN8-202ENST00000366873 LRRTM3Q86VH5 581 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 CEP57Q86XR8 500 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 CRYBG2Q8N1P7 616 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 SLC35F6Q8N357 371 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 EPS8L1Q8TE68 723 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 TMEM176AQ96HP8 235 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 PANX2Q96RD6 677 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 HAUS4Q9H6D7 363 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 ALG13Q9NP73 1137 aaKnown RBP10.37□□□□□ -0.75
CAPN8-202ENST00000366873 DDX43Q9NXZ2 648 aaKnown RBP10.37□□□□□ -0.75
CAPN8-202ENST00000366873 NOCTQ9UK39 431 aaKnown RBP10.37□□□□□ -0.75
CAPN8-202ENST00000366873 PCDHB12Q9Y5F1 795 aa10.37□□□□□ -0.75
CAPN8-202ENST00000366873 ENC1O14682 589 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 SOD2P04179 222 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 CYP11B1P15538 503 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 OAS2P29728 719 aaKnown RBP10.36□□□□□ -0.75
CAPN8-202ENST00000366873 LHX1P48742 406 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 YWHAHQ04917 246 aaPredicted RBP10.36□□□□□ -0.75
CAPN8-202ENST00000366873 PTK2Q05397 1052 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 OVOS1Q6IE37 1185 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 RSRC2Q7L4I2 434 aaKnown RBP10.36□□□□□ -0.75
CAPN8-202ENST00000366873 ZNF571Q7Z3V5 609 aaPredicted RBP10.36□□□□□ -0.75
CAPN8-202ENST00000366873 DDX53Q86TM3 631 aaKnown RBP10.36□□□□□ -0.75
CAPN8-202ENST00000366873 ACOT1Q86TX2 421 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 UNC93AQ86WB7 457 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 LNX1Q8TBB1 728 aaPredicted RBP10.36□□□□□ -0.75
CAPN8-202ENST00000366873 TMEM169Q96HH4 297 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 PNKPQ96T60 521 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 PKMYT1Q99640 499 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 NT5C1AQ9BXI3 368 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 NUCKS1Q9H1E3 243 aaKnown RBP10.36□□□□□ -0.75
CAPN8-202ENST00000366873 AAASQ9NRG9 546 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 MTUS1Q9ULD2 1270 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 TRIOBPQ9H2D6 2365 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 KIAA1671Q9BY89 1806 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 TPM1P09493 284 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 CHRNB2P17787 502 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 ASTE1Q2TB18 679 aaPredicted RBP10.36□□□□□ -0.75
CAPN8-202ENST00000366873 SLC20A1Q8WUM9 679 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 ZNF606Q8WXB4 792 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 ACBD6Q9BR61 282 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 TTPALQ9BTX7 342 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 CRTAC1Q9NQ79 661 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 DSEQ9UL01 958 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 GBF1Q92538 1859 aa10.36□□□□□ -0.75
CAPN8-202ENST00000366873 MYBPHLA2RUH7 354 aa10.35□□□□□ -0.75
CAPN8-202ENST00000366873 LILRB3O75022 631 aa10.35□□□□□ -0.75
CAPN8-202ENST00000366873 PPM1AP35813 382 aa10.35□□□□□ -0.75
CAPN8-202ENST00000366873 ERVK-21P61565 698 aa10.35□□□□□ -0.75
CAPN8-202ENST00000366873 PSMC1P62191 440 aaKnown RBP10.35□□□□□ -0.75
CAPN8-202ENST00000366873 ELAVL2Q12926 359 aaKnown RBP10.35□□□□□ -0.75
CAPN8-202ENST00000366873 SMC1AQ14683 1233 aaKnown RBP10.35□□□□□ -0.75
CAPN8-202ENST00000366873 USP41Q3LFD5 358 aa10.35□□□□□ -0.75
CAPN8-202ENST00000366873 SMYD5Q6GMV2 418 aa10.35□□□□□ -0.75
CAPN8-202ENST00000366873 PRSS55Q6UWB4 352 aaPredicted RBP10.35□□□□□ -0.75
CAPN8-202ENST00000366873 PALB2Q86YC2 1186 aa10.35□□□□□ -0.75
CAPN8-202ENST00000366873 VPS52Q8N1B4 723 aa10.35□□□□□ -0.75
CAPN8-202ENST00000366873 SPATA18Q8TC71 538 aa10.35□□□□□ -0.75
CAPN8-202ENST00000366873 SPPL3Q8TCT6 385 aa10.35□□□□□ -0.75
CAPN8-202ENST00000366873 PLVAPQ9BX97 442 aa10.35□□□□□ -0.75
CAPN8-202ENST00000366873 SNX25Q9H3E2 840 aa10.35□□□□□ -0.75
CAPN8-202ENST00000366873 TMLHEQ9NVH6 421 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms