RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 SYNCQ9H7C4 482 aa21.54■■□□□ 1.04
COL13A1-202ENST00000357811 COL11A1P12107 1806 aaPredicted RBP21.53■■□□□ 1.04
COL13A1-202ENST00000357811 SPDYE16A6NNV3 312 aaPredicted RBP21.53■■□□□ 1.04
COL13A1-202ENST00000357811 ZBTB7AO95365 584 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 OVGP1Q12889 678 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 FNBP1LQ5T0N5 605 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 PPP1R21Q6ZMI0 780 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 TMEM35BQ8NCS4 154 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 HSPH1Q92598 858 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 RXFP1Q9HBX9 757 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 MCM8Q9UJA3 840 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 ADGRA2Q96PE1 1338 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 GBP2P32456 591 aaPredicted RBP21.53■■□□□ 1.04
COL13A1-202ENST00000357811 CDKN2BP42772 138 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 CTCFP49711 727 aaPredicted RBP21.53■■□□□ 1.04
COL13A1-202ENST00000357811 STAT5BP51692 787 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 VCPP55072 806 aaKnown RBP21.53■■□□□ 1.04
COL13A1-202ENST00000357811 LACTBP83111 547 aaPredicted RBP21.53■■□□□ 1.04
COL13A1-202ENST00000357811 BBS9Q3SYG4 887 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 KCNV2Q8TDN2 545 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 EURLQ9NYK6 297 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 PRKAG3Q9UGI9 489 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 CYTH4Q9UIA0 394 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 HAO1Q9UJM8 370 aa21.53■■□□□ 1.04
COL13A1-202ENST00000357811 LDHAP00338 332 aaKnown RBP21.52■■□□□ 1.04
COL13A1-202ENST00000357811 TCF7P36402 384 aaPredicted RBP21.52■■□□□ 1.04
COL13A1-202ENST00000357811 ZNF699Q32M78 642 aa21.52■■□□□ 1.04
COL13A1-202ENST00000357811 PTPN20Q4JDL3 420 aa21.52■■□□□ 1.04
COL13A1-202ENST00000357811 VCPIP1Q96JH7 1222 aa21.52■■□□□ 1.04
COL13A1-202ENST00000357811 DCTN4Q9UJW0 460 aa21.52■■□□□ 1.04
COL13A1-202ENST00000357811 NFASCO94856 1347 aa21.52■■□□□ 1.04
COL13A1-202ENST00000357811 ADCY3O60266 1144 aa21.52■■□□□ 1.04
COL13A1-202ENST00000357811 ASMTLO95671 621 aa21.52■■□□□ 1.04
COL13A1-202ENST00000357811 RAB6CQ53S08 254 aa21.52■■□□□ 1.04
COL13A1-202ENST00000357811 CALN1Q9BXU9 219 aa21.52■■□□□ 1.04
COL13A1-202ENST00000357811 RAB6CQ9H0N0 254 aa21.52■■□□□ 1.04
COL13A1-202ENST00000357811 TCEA3O75764 348 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 STAM2O75886 525 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 ANP32DO95626 131 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 GPX6P59796 221 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 WLSQ5T9L3 541 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 RNASEH2BQ5TBB1 312 aaKnown RBP21.51■■□□□ 1.03
COL13A1-202ENST00000357811 ARFGAP1Q8N6T3 406 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 NSMCE1Q8WV22 266 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 AS3MTQ9HBK9 375 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 PIM2Q9P1W9 311 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 INO80B-WBP1J3KQ70 363 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 SLC8A1P32418 973 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 BASP1P80723 227 aaKnown RBP21.51■■□□□ 1.03
COL13A1-202ENST00000357811 OASLQ15646 514 aaKnown RBP21.51■■□□□ 1.03
COL13A1-202ENST00000357811 HIF1AQ16665 826 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 HHATQ5VTY9 493 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 LVRNQ6Q4G3 990 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 FAM71DQ8N9W8 422 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 INO80BQ9C086 356 aaPredicted RBP21.51■■□□□ 1.03
COL13A1-202ENST00000357811 CFAP73A6NFT4 308 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 CBX6O95503 412 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 CALB1P05937 261 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 KRT3P12035 628 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 RXRBP28702 533 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 PSMC1P62191 440 aaKnown RBP21.51■■□□□ 1.03
COL13A1-202ENST00000357811 LMNB2Q03252 620 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 CATSPERGQ6ZRH7 1159 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 C3orf62Q6ZUJ4 267 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 CENPUQ71F23 418 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 ZC3H18Q86VM9 953 aaKnown RBP21.51■■□□□ 1.03
COL13A1-202ENST00000357811 NCAPG2Q86XI2 1143 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 PYROXD1Q8WU10 500 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 NIF3L1Q9GZT8 377 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 HMGXB4Q9UGU5 601 aa21.51■■□□□ 1.03
COL13A1-202ENST00000357811 GRAP2O75791 330 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 ADRA1DP25100 572 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 MSH2P43246 934 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 GCLCP48506 637 aaPredicted RBP21.5■■□□□ 1.03
COL13A1-202ENST00000357811 TREML2Q5T2D2 321 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 SH3PXD2AQ5TCZ1 1133 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 BRSK2Q8IWQ3 736 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 UNC45BQ8IWX7 931 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 LRRC8CQ8TDW0 803 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 METTL5Q9NRN9 209 aaKnown RBP21.5■■□□□ 1.03
COL13A1-202ENST00000357811 DNAH12Q6ZR08 3092 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 NFKBIEO00221 500 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 ELF1P32519 619 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 ZNF132P52740 706 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 SPARCL1Q14515 664 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 DUOXA2Q1HG44 320 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 NPNTQ6UXI9 565 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 CAMKK2Q96RR4 588 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 NPHS2Q9NP85 383 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 CHKBQ9Y259 395 aa21.5■■□□□ 1.03
COL13A1-202ENST00000357811 CLUHO75153 1309 aa21.49■■□□□ 1.03
COL13A1-202ENST00000357811 MSCO60682 206 aa21.49■■□□□ 1.03
COL13A1-202ENST00000357811 DIAPH2O60879 1101 aa21.49■■□□□ 1.03
COL13A1-202ENST00000357811 LRCH4O75427 683 aa21.49■■□□□ 1.03
COL13A1-202ENST00000357811 MMRN1Q13201 1228 aa21.49■■□□□ 1.03
COL13A1-202ENST00000357811 DCAF15Q66K64 600 aa21.49■■□□□ 1.03
COL13A1-202ENST00000357811 RSAD2Q8WXG1 361 aa21.49■■□□□ 1.03
COL13A1-202ENST00000357811 CPXM1Q96SM3 734 aa21.49■■□□□ 1.03
COL13A1-202ENST00000357811 GINM1Q9NU53 330 aa21.49■■□□□ 1.03
COL13A1-202ENST00000357811 FARP2O94887 1054 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms