RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TMEM150BA6NC51 233 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 EXTL3O43909 919 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 SNRPAP09012 282 aaKnown RBP12.07□□□□□ -0.48
VPS33A-201ENST00000267199 BGNP21810 368 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 PRKCIP41743 596 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 RARRES1P49788 294 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 OCA2Q04671 838 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 AUHQ13825 339 aaKnown RBP12.07□□□□□ -0.48
VPS33A-201ENST00000267199 ARHGEF19Q8IW93 802 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 ATP6V1E2Q96A05 226 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 AGAP3Q96P47 875 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 KCNMB3Q9NPA1 279 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 ADAMTS3O15072 1205 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 ATP9BO43861 1147 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 GRAP2O75791 330 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 TNFRSF8P28908 595 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 CAP2P40123 477 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 CENPCQ03188 943 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 PIGHQ14442 188 aaPredicted RBP12.07□□□□□ -0.48
VPS33A-201ENST00000267199 CDR2LQ86X02 465 aaPredicted RBP12.07□□□□□ -0.48
VPS33A-201ENST00000267199 TMEM121Q9BTD3 319 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 FOXP3Q9BZS1 431 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 DTNAQ9Y4J8 743 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 TISP43B9A030 160 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 FANCGO15287 622 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 PDGFRAP16234 1089 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 STMN1P16949 149 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 MUTP22033 750 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 AP1B1Q10567 949 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 PKN2Q16513 984 aaKnown RBP12.07□□□□□ -0.48
VPS33A-201ENST00000267199 KCNT1Q5JUK3 1230 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 ZNF677Q86XU0 584 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 C1orf131Q8NDD1 294 aaKnown RBP12.07□□□□□ -0.48
VPS33A-201ENST00000267199 FBXO36Q8NEA4 188 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 ZMAT2Q96NC0 199 aaKnown RBP12.07□□□□□ -0.48
VPS33A-201ENST00000267199 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
VPS33A-201ENST00000267199 CES2O00748 559 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 MEIS2O14770 477 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 PIAS1O75925 651 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 YY1P25490 414 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 AQP5P55064 265 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 SOX10P56693 466 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 EFTUD2Q15029 972 aaKnown RBP eCLIP12.06□□□□□ -0.48
VPS33A-201ENST00000267199 SGSM1Q2NKQ1 1148 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 C11orf63Q6NUN7 778 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 KAT5Q92993 513 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 PAFAH2Q99487 392 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 DDX50Q9BQ39 737 aaKnown RBP12.06□□□□□ -0.48
VPS33A-201ENST00000267199 FGFBP2Q9BYJ0 223 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 C20orf96Q9NUD7 363 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-201ENST00000267199 DDX18Q9NVP1 670 aaKnown RBP12.06□□□□□ -0.48
VPS33A-201ENST00000267199 SLC5A4Q9NY91 659 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 TAS2R14Q9NYV8 317 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 NINJ2Q9NZG7 142 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 MARCKSL1P49006 195 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 RGS7P49802 495 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 TNFAIP2Q03169 654 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 CYP4A22Q5TCH4 519 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 CRELD2Q6UXH1 353 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-201ENST00000267199 SPATA33Q96N06 139 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 PWWP2AQ96N64 755 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 SLCO1B3Q9NPD5 702 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 CHST7Q9NS84 486 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 GGA2Q9UJY4 613 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 COPAP53621 1224 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 SLC34A1Q06495 639 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 CUL2Q13617 745 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 SLC44A4Q53GD3 710 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 RAB44Q7Z6P3 723 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-201ENST00000267199 IFNEQ86WN2 208 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 KIAA1683Q9H0B3 1180 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 ACP6Q9NPH0 428 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 KIF1AQ12756 1690 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 ACTR2P61160 394 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 MYBPC2Q14324 1141 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 FASTKD1Q53R41 847 aaKnown RBP12.06□□□□□ -0.48
VPS33A-201ENST00000267199 LAYNQ6UX15 382 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 LRRC74BQ6ZQY2 392 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 ARMCX2Q7L311 632 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 ZNF280CQ8ND82 737 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 TBC1D10AQ9BXI6 508 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 ASCC2Q9H1I8 757 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-201ENST00000267199 FAM53CQ9NYF3 392 aa12.06□□□□□ -0.48
VPS33A-201ENST00000267199 RGL2O15211 777 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 GSTA4O15217 222 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 MAFGO15525 162 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 TPST1O60507 370 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 TLR2O60603 784 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 PTDSS1P48651 473 aaKnown RBP12.05□□□□□ -0.48
VPS33A-201ENST00000267199 NCALDP61601 193 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 ARHGAP22Q7Z5H3 698 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 LRRC71Q8N4P6 559 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 ZNF384Q8TF68 577 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 DACT3Q96B18 629 aaPredicted RBP12.05□□□□□ -0.48
VPS33A-201ENST00000267199 CLMNQ96JQ2 1002 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 C17orf75Q9HAS0 396 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 LRRC4BQ9NT99 713 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 AGAP1Q9UPQ3 857 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 AKAP10O43572 662 aa12.05□□□□□ -0.48
VPS33A-201ENST00000267199 UNC5CO95185 931 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms