RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 NCLNQ969V3 563 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 DDIT4Q9NX09 232 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 FAM237AA0A1B0GTK4 181 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 MTSS1O43312 755 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 C4orf22Q6V702 233 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 ACTRT1Q8TDG2 376 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 MTMR8Q96EF0 704 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 IL17RAQ96F46 866 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 MMTAG2Q9BU76 263 aaKnown RBP14.61□□□□□ -0.07
CDH3-201ENST00000264012 LSM7Q9UK45 103 aaKnown RBP14.61□□□□□ -0.07
CDH3-201ENST00000264012 M0QYT0 321 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 CYBBP04839 570 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 POLBP06746 335 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 GFAPP14136 432 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 INSRRP14616 1297 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 EFTUD2Q15029 972 aaKnown RBP eCLIP14.61□□□□□ -0.07
CDH3-201ENST00000264012 MAPRE1Q15691 268 aaKnown RBP14.61□□□□□ -0.07
CDH3-201ENST00000264012 TATDN2Q93075 761 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 P2RX7Q99572 595 aaKnown RBP14.61□□□□□ -0.07
CDH3-201ENST00000264012 PABPC3Q9H361 631 aaKnown RBP14.61□□□□□ -0.07
CDH3-201ENST00000264012 ADA2Q9NZK5 511 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 DMGDHQ9UI17 866 aaKnown RBP14.61□□□□□ -0.07
CDH3-201ENST00000264012 USP15Q9Y4E8 981 aaPredicted RBP14.61□□□□□ -0.07
CDH3-201ENST00000264012 AP1G2O75843 785 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 CXCL8P10145 99 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 ODC1P11926 461 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 H2AFXP16104 143 aaPredicted RBP14.61□□□□□ -0.07
CDH3-201ENST00000264012 HADHAP40939 763 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 SLC12A3P55017 1021 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 STX3Q13277 289 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 MEI1Q5TIA1 1274 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 IL31Q6EBC2 164 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 SNX19Q92543 992 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 TRIM54Q9BYV2 358 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 RANBP17Q9H2T7 1088 aaKnown RBP14.61□□□□□ -0.07
CDH3-201ENST00000264012 LRRC4BQ9NT99 713 aa14.61□□□□□ -0.07
CDH3-201ENST00000264012 KIF1AQ12756 1690 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 PRRG1O14668 218 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 PROSCO94903 275 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 CTCFP49711 727 aaPredicted RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 TBX2Q13207 712 aaPredicted RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 PCSK7Q16549 785 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 DDIASQ8IXT1 998 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 LRRC43Q8N309 656 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 RIBC1Q8N443 379 aaPredicted RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 ARL8AQ96BM9 186 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 FRMD8Q9BZ67 464 aaPredicted RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 MRPL40Q9NQ50 206 aaKnown RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 ARHGEF38Q9NXL2 777 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 AFF4Q9UHB7 1163 aaKnown RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 EEF1B2P24534 225 aaKnown RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 SPRP35270 261 aaPredicted RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 RAP1GAPP47736 663 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 IRAK1P51617 712 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 CNTN2Q02246 1040 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 IPMKQ8NFU5 416 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 RMDN2Q96LZ7 410 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 FUT8Q9BYC5 575 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 TRIM4Q9C037 500 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 NPHS2Q9NP85 383 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 C20orf96Q9NUD7 363 aaPredicted RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 ABI2Q9NYB9 513 aaPredicted RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 GPR182O15218 404 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 ALDH5A1P51649 535 aaPredicted RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 TFDP3Q5H9I0 405 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 TMCO4Q5TGY1 634 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 LCA5Q86VQ0 697 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 SLITRK1Q96PX8 696 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 A1CFQ9NQ94 594 aaKnown RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 KRT82Q9NSB4 513 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 CPA4Q9UI42 421 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 PPME1Q9Y570 386 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 LSM8O95777 96 aaKnown RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 ZNF286BP0CG31 522 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 PTPN11Q06124 597 aaPredicted RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 COL9A3Q14050 684 aaPredicted RBP14.6□□□□□ -0.07
CDH3-201ENST00000264012 CHSY1Q86X52 802 aa14.6□□□□□ -0.07
CDH3-201ENST00000264012 DNAJC6O75061 913 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 PTGER2P43116 358 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 SEC24CP53992 1094 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 CLEC16AQ2KHT3 1053 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 FAXCQ5TGI0 409 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 TTC23LQ6PF05 361 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 CYP3A43Q9HB55 503 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 MARCOQ9UEW3 520 aaPredicted RBP14.59□□□□□ -0.07
CDH3-201ENST00000264012 YY1P25490 414 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 TFB1MQ8WVM0 346 aaKnown RBP14.59□□□□□ -0.07
CDH3-201ENST00000264012 OSMRQ99650 979 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 XAB2Q9HCS7 855 aaKnown RBP14.59□□□□□ -0.07
CDH3-201ENST00000264012 CYB561D2O14569 222 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 MAP3K6O95382 1288 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 ANP32DO95626 131 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 TM4SF1P30408 202 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 PHEXP78562 749 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 ABRAQ8N0Z2 381 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 GPC2Q8N158 579 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 ZNF669Q96BR6 464 aaPredicted RBP14.59□□□□□ -0.07
CDH3-201ENST00000264012 KCNMB3Q9NPA1 279 aa14.59□□□□□ -0.07
CDH3-201ENST00000264012 ALDH18A1P54886 795 aaKnown RBP14.59□□□□□ -0.07
CDH3-201ENST00000264012 C10orf120Q5SQS8 335 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms