RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 SPATA21Q7Z572 469 aa9.64□□□□□ -0.87
SYDE2-201ENST00000234668 UNC45BQ8IWX7 931 aa9.64□□□□□ -0.87
SYDE2-201ENST00000234668 RCOR2Q8IZ40 523 aa9.64□□□□□ -0.87
SYDE2-201ENST00000234668 FAM71DQ8N9W8 422 aa9.64□□□□□ -0.87
SYDE2-201ENST00000234668 NLGN2Q8NFZ4 835 aa9.64□□□□□ -0.87
SYDE2-201ENST00000234668 PIWIL1Q96J94 861 aaKnown RBP9.64□□□□□ -0.87
SYDE2-201ENST00000234668 MRPL4Q9BYD3 311 aaKnown RBP9.64□□□□□ -0.87
SYDE2-201ENST00000234668 PITPNM3Q9BZ71 974 aa9.64□□□□□ -0.87
SYDE2-201ENST00000234668 NIF3L1Q9GZT8 377 aa9.64□□□□□ -0.87
SYDE2-201ENST00000234668 CXCL16Q9H2A7 254 aa9.64□□□□□ -0.87
SYDE2-201ENST00000234668 RNPEPQ9H4A4 650 aa9.64□□□□□ -0.87
SYDE2-201ENST00000234668 METTL5Q9NRN9 209 aaKnown RBP9.64□□□□□ -0.87
SYDE2-201ENST00000234668 hCG_1818297A0A087WSY0 165 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 IGF2BP3O00425 579 aaKnown RBP eCLIP9.63□□□□□ -0.87
SYDE2-201ENST00000234668 DNALI1O14645 258 aaPredicted RBP9.63□□□□□ -0.87
SYDE2-201ENST00000234668 AVILO75366 819 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 HOXC6P09630 235 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 TAC1P20366 129 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 CETN2P41208 172 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 CDKN2BP42772 138 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 BAG6P46379 1132 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 RGS7P49802 495 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 RNASELQ05823 741 aaKnown RBP9.63□□□□□ -0.87
SYDE2-201ENST00000234668 SLC1A5Q15758 541 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 BBS9Q3SYG4 887 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 LACTB2Q53H82 288 aaPredicted RBP9.63□□□□□ -0.87
SYDE2-201ENST00000234668 FAXCQ5TGI0 409 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 EFCAB12Q6NXP0 572 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 C12orf29Q8N999 325 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 NETO2Q8NC67 525 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 C3orf20Q8ND61 904 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 MAML1Q92585 1016 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 SPATA33Q96N06 139 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 LPIN3Q9BQK8 851 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 CCDC77Q9BR77 488 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 NIFKQ9BYG3 293 aaKnown RBP9.63□□□□□ -0.87
SYDE2-201ENST00000234668 MAGEB5Q9BZ81 275 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 SPATC1LQ9H0A9 340 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 GPATCH2LQ9NWQ4 482 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 GPR25O00155 361 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 OGTO15294 1046 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 LRCH4O75427 683 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 MAFO75444 373 aaPredicted RBP9.63□□□□□ -0.87
SYDE2-201ENST00000234668 DDNO94850 711 aaPredicted RBP9.63□□□□□ -0.87
SYDE2-201ENST00000234668 ITGB3P05106 788 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 FGFR1P11362 822 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 CA4P22748 312 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 ASPAP45381 313 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 CTCFP49711 727 aaPredicted RBP9.63□□□□□ -0.87
SYDE2-201ENST00000234668 ZNF132P52740 706 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 OAZ1P54368 228 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 MCCD1P59942 119 aaPredicted RBP9.63□□□□□ -0.87
SYDE2-201ENST00000234668 C15orf59Q2T9L4 293 aaPredicted RBP9.63□□□□□ -0.87
SYDE2-201ENST00000234668 ACCSLQ4AC99 568 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 TFDP3Q5H9I0 405 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 LBX2Q6XYB7 198 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 TRIM72Q6ZMU5 477 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 ARMC9Q7Z3E5 817 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 ZCCHC9Q8N567 271 aaKnown RBP9.63□□□□□ -0.87
SYDE2-201ENST00000234668 ALLCQ8N6M5 410 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 NSRP1Q9H0G5 558 aaKnown RBP9.63□□□□□ -0.87
SYDE2-201ENST00000234668 XYLT2Q9H1B5 865 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 TRABDQ9H4I3 376 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 NR2E3Q9Y5X4 410 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 SNCAIPQ9Y6H5 919 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 WDR81Q562E7 1941 aa9.63□□□□□ -0.87
SYDE2-201ENST00000234668 ZBTB42B2RXF5 422 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 STAM2O75886 525 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 SUN1O94901 812 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 VTNP04004 478 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 ERBB2P04626 1255 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 RPS12P25398 132 aaKnown RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 RDXP35241 583 aaKnown RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 NCALDP61601 193 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 IRX3P78415 501 aaPredicted RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 BASP1P80723 227 aaKnown RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 ATP11AP98196 1134 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 OVGP1Q12889 678 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 SGSM1Q2NKQ1 1148 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 ATF7IP2Q5U623 682 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 SCYL2Q6P3W7 929 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 RFX6Q8HWS3 928 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 KCTD6Q8NC69 237 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 TMEM237Q96Q45 408 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 MAK16Q9BXY0 300 aaKnown RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 POLR2AP24928 1970 aaKnown RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 EIF4E1BA6NMX2 242 aaKnown RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 FZD9O00144 591 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 PIGRP01833 764 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 KRT16P08779 473 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 KRT4P19013 534 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 MAN1A1P33908 653 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 VCPP55072 806 aaKnown RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 GPX6P59796 221 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 TMEM62Q0P6H9 643 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 XRCC4Q13426 336 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 TTLL12Q14166 644 aaPredicted RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 EAPPQ56P03 285 aaPredicted RBP9.62□□□□□ -0.87
SYDE2-201ENST00000234668 C1orf228Q6PIY5 440 aa9.62□□□□□ -0.87
SYDE2-201ENST00000234668 C3orf62Q6ZUJ4 267 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms