RNA–Protein interactions for RNA: ENST00000232607.6

UMPS-201, Transcript of uridine monophosphate synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UMPS, Length 6,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UMPS-201ENST00000232607 FOPNLQ96NB1 174 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 RPRD1AQ96P16 312 aaPredicted RBP12.85□□□□□ -0.35
UMPS-201ENST00000232607 KDM4CQ9H3R0 1056 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 FOXN3O00409 490 aaPredicted RBP12.85□□□□□ -0.35
UMPS-201ENST00000232607 PQBP1O60828 265 aaKnown RBP12.85□□□□□ -0.35
UMPS-201ENST00000232607 FKBP9O95302 570 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 SLC25A27O95847 323 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 PYGBP11216 843 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 MBL2P11226 248 aaPredicted RBP12.85□□□□□ -0.35
UMPS-201ENST00000232607 LAMC2Q13753 1193 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 FKBP9P1Q75LS8 142 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 SPATA21Q7Z572 469 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 CYP4F12Q9HCS2 524 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 CHCHD3Q9NX63 227 aaKnown RBP12.85□□□□□ -0.35
UMPS-201ENST00000232607 SLC25A13Q9UJS0 675 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 MYO1CO00159 1063 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 GRIN3BO60391 1043 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 ITGB6P18564 788 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 MAGEA4P43358 317 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 CHI3L2Q15782 390 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 JAMLQ86YT9 394 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 RAB42Q8N4Z0 105 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 EMC1Q8N766 993 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 CYP2W1Q8TAV3 490 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 INPP5DQ92835 1189 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 YME1L1Q96TA2 773 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 NIF3L1Q9GZT8 377 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 PIF1Q9H611 641 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 NDE1Q9NXR1 346 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 ZC3H13Q5T200 1668 aaKnown RBP12.85□□□□□ -0.35
UMPS-201ENST00000232607 C5orf58C9J3I9 102 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 PON1P27169 355 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 CTCFP49711 727 aaPredicted RBP12.85□□□□□ -0.35
UMPS-201ENST00000232607 CATSPERBQ9H7T0 1116 aa12.85□□□□□ -0.35
UMPS-201ENST00000232607 SCAMP3O14828 347 aaKnown RBP12.84□□□□□ -0.35
UMPS-201ENST00000232607 TAF6P49848 677 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 CUL2Q13617 745 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 EML3Q32P44 896 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 TFB1MQ8WVM0 346 aaKnown RBP12.84□□□□□ -0.35
UMPS-201ENST00000232607 SLC38A7Q9NVC3 462 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 SNTG2Q9NY99 539 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 TUBE1Q9UJT0 475 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 PDS5AQ29RF7 1337 aaKnown RBP12.84□□□□□ -0.35
UMPS-201ENST00000232607 TSPAN3O60637 253 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 SREBF2Q12772 1141 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 EFEMP1Q12805 493 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 AP1ARQ63HQ0 302 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 ANKS3Q6ZW76 656 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 NOA1Q8NC60 698 aaKnown RBP12.84□□□□□ -0.35
UMPS-201ENST00000232607 ARMC2Q8NEN0 867 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 CHST13Q8NET6 341 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 NMRK2Q9NPI5 230 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 PRMT7Q9NVM4 692 aaPredicted RBP12.84□□□□□ -0.35
UMPS-201ENST00000232607 A0A087WZ62 844 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 ACAT1P24752 427 aaKnown RBP12.84□□□□□ -0.35
UMPS-201ENST00000232607 FBXW10Q5XX13 1052 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 FDXACB1Q9BRP7 624 aaPredicted RBP12.84□□□□□ -0.35
UMPS-201ENST00000232607 TRIM62Q9BVG3 475 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 PCDHB2Q9Y5E7 798 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 SKAP2O75563 359 aaPredicted RBP12.84□□□□□ -0.35
UMPS-201ENST00000232607 ASS1P00966 412 aaKnown RBP12.84□□□□□ -0.35
UMPS-201ENST00000232607 RBP3P10745 1247 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 ODC1P11926 461 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 HIC1Q14526 733 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 TTC39CQ8N584 583 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 DNAJB3Q8WWF6 145 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 CACNA2D2Q9NY47 1150 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 LCMT1Q9UIC8 334 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 CYP11B2P19099 503 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 PSMC6P62333 389 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 STAT4Q14765 748 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 EDEM1Q92611 657 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 TIPINQ9BVW5 301 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 C6orf203Q9P0P8 240 aaPredicted RBP12.84□□□□□ -0.35
UMPS-201ENST00000232607 RIMS1Q86UR5 1692 aaKnown RBP12.84□□□□□ -0.35
UMPS-201ENST00000232607 CALCAP01258 141 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 PYGLP06737 847 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 STAG3L1P0CL83 205 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 SNX17Q15036 470 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 FBXO32Q969P5 355 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 FAM162AQ96A26 154 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 TSC22D3Q99576 134 aa12.84□□□□□ -0.35
UMPS-201ENST00000232607 PCSK1P29120 753 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 FXR2P51116 673 aaKnown RBP eCLIP12.83□□□□□ -0.36
UMPS-201ENST00000232607 GTF2A2P52657 109 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 GALNTL6Q49A17 601 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 PARP9Q8IXQ6 854 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 CLEC4FQ8N1N0 589 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 ZNF473Q8WTR7 871 aaKnown RBP12.83□□□□□ -0.36
UMPS-201ENST00000232607 PXMP2Q9NR77 195 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 CXCL8P10145 99 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 CYP2C8P10632 490 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 RABGAP1LQ5R372 815 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 IL17RAQ96F46 866 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 ZIM3Q96PE6 472 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 SLITRK1Q96PX8 696 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 TEX12Q9BXU0 123 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 UVRAGQ9P2Y5 699 aa12.83□□□□□ -0.36
UMPS-201ENST00000232607 SPASTQ9UBP0 616 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms