RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 HBP1O60381 514 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 MAP3K6O95382 1288 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 ASS1P00966 412 aaKnown RBP10.53□□□□□ -0.72
USP11-201ENST00000218348 IFNB1P01574 187 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 ZSCAN5DPP0CG00 497 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 ETS1P14921 441 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 ARF4P18085 180 aaPredicted RBP10.53□□□□□ -0.72
USP11-201ENST00000218348 POLR2BP30876 1174 aaKnown RBP10.53□□□□□ -0.72
USP11-201ENST00000218348 BPIFB4P59827 614 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 PRKCZQ05513 592 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 ZNF844Q08AG5 666 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 CCDC15Q0P6D6 951 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 SLC29A2Q14542 456 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 DNAJC24Q6P3W2 148 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 MON1BQ7L1V2 547 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 ENOSF1Q7L5Y1 443 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 TRIB2Q92519 343 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 CD101Q93033 1021 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 ANKRD36BP1Q96IX9 119 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 NIF3L1Q9GZT8 377 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 TMEM134Q9H6X4 195 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 CDHR5Q9HBB8 845 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 KLK14Q9P0G3 267 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 CPSF3Q9UKF6 684 aaKnown RBP10.53□□□□□ -0.72
USP11-201ENST00000218348 AGAP1Q9UPQ3 857 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 GOLGA8KD6RF30 607 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 ACKR2O00590 384 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 HCRTO43612 131 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 PIAS1O75925 651 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 NR1D1P20393 614 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 RGS7P49802 495 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 MAGOHP61326 146 aaKnown RBP10.53□□□□□ -0.72
USP11-201ENST00000218348 ZNF200P98182 395 aaPredicted RBP10.53□□□□□ -0.72
USP11-201ENST00000218348 OGDHQ02218 1023 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 MBTD1Q05BQ5 628 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 GRIK3Q13003 919 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 CDO1Q16878 200 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 CD99L2Q8TCZ2 262 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 VTI1AQ96AJ9 217 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 LRRC45Q96CN5 670 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 RPS6KC1Q96S38 1066 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 APBA2Q99767 749 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 IFT122Q9HBG6 1241 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 BLOC1S6Q9UL45 172 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 SIP14410 1827 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 LRRD1A4D1F6 860 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.53□□□□□ -0.72
USP11-201ENST00000218348 FAM189A1O60320 539 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 C22orf31O95567 290 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 CA8P35219 290 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 RDXP35241 583 aaKnown RBP10.53□□□□□ -0.72
USP11-201ENST00000218348 HSPA9P38646 679 aaKnown RBP10.53□□□□□ -0.72
USP11-201ENST00000218348 ADCY8P40145 1251 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 PTGIRP43119 386 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 MAGEA10P43363 369 aaPredicted RBP10.53□□□□□ -0.72
USP11-201ENST00000218348 CLNS1AP54105 237 aaKnown RBP10.53□□□□□ -0.72
USP11-201ENST00000218348 TFDP1Q14186 410 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 NAA25Q14CX7 972 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 DUPD1Q68J44 220 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 ZPBP2Q6X784 338 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 ERICH1Q86X53 443 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 C12orf29Q8N999 325 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 C1orf127Q8N9H9 656 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 SOCS4Q8WXH5 440 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 OSMRQ99650 979 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 DDX23Q9BUQ8 820 aaKnown RBP10.53□□□□□ -0.72
USP11-201ENST00000218348 ZCWPW1Q9H0M4 648 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 SDCBP2Q9H190 292 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 RASAL2Q9UJF2 1139 aa10.53□□□□□ -0.72
USP11-201ENST00000218348 PMM2O15305 246 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 GNRH1P01148 92 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 KRT1P04264 644 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 HOXD8P13378 290 aaPredicted RBP10.52□□□□□ -0.73
USP11-201ENST00000218348 SMPD1P17405 629 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 TPP2P29144 1249 aaPredicted RBP10.52□□□□□ -0.73
USP11-201ENST00000218348 BEX3Q00994 111 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 CENPCQ03188 943 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 RAB6CQ53S08 254 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 ZNF667Q5HYK9 610 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 WDR49Q8IV35 697 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 OR6J1Q8NGC5 347 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 HEXIM2Q96MH2 286 aaKnown RBP10.52□□□□□ -0.73
USP11-201ENST00000218348 SELENOSQ9BQE4 189 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 RAB6CQ9H0N0 254 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 MLXIPLQ9NP71 852 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 FAM114A2Q9NRY5 505 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 FAM49BQ9NUQ9 324 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 ASB14A6NK59 587 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 ZC3H11AO75152 810 aaKnown RBP eCLIP10.52□□□□□ -0.73
USP11-201ENST00000218348 GH1P01241 217 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 PIGRP01833 764 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 CYP1A1P04798 512 aaPredicted RBP10.52□□□□□ -0.73
USP11-201ENST00000218348 CYBAP13498 195 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 CYP2B6P20813 491 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 TBXAS1P24557 533 aaPredicted RBP10.52□□□□□ -0.73
USP11-201ENST00000218348 AKAP5P24588 427 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 NRLP54845 237 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 SGSM1Q2NKQ1 1148 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 ZDHHC24Q6UX98 284 aa10.52□□□□□ -0.73
USP11-201ENST00000218348 PLPPR4Q7Z2D5 763 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms