RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 BBS5Q8N3I7 341 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 ZBTB38Q8NAP3 1195 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-213ENST00000638883 IGDCC4Q8TDY8 1250 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 ZHX3Q9H4I2 956 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 EPB41L4AQ9HCS5 686 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-213ENST00000638883 RABGEF1Q9UJ41 708 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 ATP6V0A2Q9Y487 856 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 SPATA31A6Q5VVP1 1343 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 ZNF532Q9HCE3 1301 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 FAM205CA6NFA0 338 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 CDH16O75309 829 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 PCCAP05165 728 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-213ENST00000638883 COL6A2P12110 1019 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 RARGP13631 454 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 TAC1P20366 129 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 AMPD1P23109 780 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 HIRAP54198 1017 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-213ENST00000638883 IFIT5Q13325 482 aaKnown RBP7.47□□□□□ -1.21
NECAP1-213ENST00000638883 DHX34Q14147 1143 aaKnown RBP7.47□□□□□ -1.21
NECAP1-213ENST00000638883 FXNQ16595 210 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 SLC45A4Q5BKX6 768 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 METTL24Q5JXM2 366 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 TMTC4Q5T4D3 741 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 EGFLAMQ63HQ2 1017 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 KRT80Q6KB66 452 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 CNNM4Q6P4Q7 775 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 RNF19BQ6ZMZ0 732 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 GDPD5Q8WTR4 605 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 PYROXD1Q8WU10 500 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 PYDC1Q8WXC3 89 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 HPS1Q92902 700 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 CLP1Q92989 425 aaKnown RBP7.47□□□□□ -1.21
NECAP1-213ENST00000638883 EHD1Q9H4M9 534 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 ANKFY1Q9P2R3 1169 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 HESX1Q9UBX0 185 aa7.47□□□□□ -1.21
NECAP1-213ENST00000638883 RSL24D1Q9UHA3 163 aaKnown RBP7.47□□□□□ -1.21
NECAP1-213ENST00000638883 RTCBQ9Y3I0 505 aaKnown RBP7.47□□□□□ -1.21
NECAP1-213ENST00000638883 PRPF3O43395 683 aaKnown RBP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 ZNF862O60290 1169 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 FKBP6O75344 327 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 TNFAIP8O95379 198 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 MSL3P1P0C860 447 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 POLR2EP19388 210 aaKnown RBP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 PSEN2P49810 448 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 ADAM17P78536 824 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 MAP3K10Q02779 954 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 TJAP1Q5JTD0 557 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 ZFYVE27Q5T4F4 411 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 DEPDC1Q5TB30 811 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 LPCAT4Q643R3 524 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 FASTKD5Q7L8L6 764 aaKnown RBP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 CLNKQ7Z7G1 428 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 MAML1Q92585 1016 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 KCNN1Q92952 543 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 LRGUKQ96M69 825 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 CDCA7Q9BWT1 371 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 OSBPL8Q9BZF1 889 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 TTC7AQ9ULT0 858 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 DTNAQ9Y4J8 743 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 KANSL1LA0AUZ9 987 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 HRO43593 1189 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 MARCH6O60337 910 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 IFNAR1P17181 557 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 VAMP1P23763 118 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 YWHAGP61981 247 aaKnown RBP eCLIP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 MSLNQ13421 630 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 OASLQ15646 514 aaKnown RBP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 CLUL1Q15846 466 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 ANKRD20A4Q4UJ75 823 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 PLEKHA7Q6IQ23 1121 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 RIPOR1Q6ZS17 1223 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 TRMT10CQ7L0Y3 403 aaKnown RBP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 UBL4BQ8N7F7 174 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 ZFP28Q8NHY6 868 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 PPP1R10Q96QC0 940 aaKnown RBP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 CGREF1Q99674 301 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 OSBPL6Q9BZF3 934 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 GBA3Q9H227 469 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 LIN28AQ9H9Z2 209 aaKnown RBP7.46□□□□□ -1.21
NECAP1-213ENST00000638883 USP29Q9HBJ7 922 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 ZSWIM5Q9P217 1185 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 ZBTB1Q9Y2K1 713 aa7.46□□□□□ -1.21
NECAP1-213ENST00000638883 EXOC1LA0A1B0GW35 172 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 BTBD19C9JJ37 291 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 H3BSA7 217 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 AP3B1O00203 1094 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 SH2B2O14492 632 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-213ENST00000638883 PFDN6O15212 129 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 ZBED4O75132 1171 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 PHF2O75151 1096 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 PRDM1O75626 825 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 ZBTB11O95625 1053 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-213ENST00000638883 SRGAP2CP0DJJ0 459 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 SRGAP2BP0DMP2 458 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 RFX1P22670 979 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 PRKACBP22694 351 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 SOX11P35716 441 aa7.46□□□□□ -1.22
NECAP1-213ENST00000638883 PIK3CAP42336 1068 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms