RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ACTRT1Q8TDG2 376 aa22.76■■□□□ 1.23
SPAST-204ENST00000621856 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.76■■□□□ 1.23
SPAST-204ENST00000621856 SQORQ9Y6N5 450 aa22.76■■□□□ 1.23
SPAST-204ENST00000621856 MYO1FO00160 1098 aa22.75■■□□□ 1.23
SPAST-204ENST00000621856 PGRMC1O00264 195 aaKnown RBP22.75■■□□□ 1.23
SPAST-204ENST00000621856 MYCP01106 439 aaPredicted RBP22.75■■□□□ 1.23
SPAST-204ENST00000621856 H2AFXP16104 143 aaPredicted RBP22.75■■□□□ 1.23
SPAST-204ENST00000621856 LRPAP1P30533 357 aa22.75■■□□□ 1.23
SPAST-204ENST00000621856 MAMLD1Q13495 774 aa22.75■■□□□ 1.23
SPAST-204ENST00000621856 CNGA2Q16280 664 aa22.75■■□□□ 1.23
SPAST-204ENST00000621856 ADAM2Q99965 735 aa22.75■■□□□ 1.23
SPAST-204ENST00000621856 TRIM7Q9C029 511 aa22.75■■□□□ 1.23
SPAST-204ENST00000621856 RBM12Q9NTZ6 932 aaKnown RBP22.75■■□□□ 1.23
SPAST-204ENST00000621856 GDAP2Q9NXN4 497 aa22.75■■□□□ 1.23
SPAST-204ENST00000621856 O00370 1275 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 SPTLC1O15269 473 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 THP07101 528 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 SOWAHAQ2M3V2 549 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 DNAJC24Q6P3W2 148 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 AGMOQ6ZNB7 445 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.74■■□□□ 1.237e-6■□□□□ 9.4
SPAST-204ENST00000621856 CARD9Q9H257 536 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 ARL5CA6NH57 179 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 ZNF623O75123 536 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 CTNNA2P26232 953 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 ACOT1Q86TX2 421 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 UNC93AQ86WB7 457 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 CPNE8Q86YQ8 564 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 RASGEF1CQ8N431 466 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 FEZF2Q8TBJ5 459 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 KRT35Q92764 455 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 PGBD4Q96DM1 585 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 TRAIPQ9BWF2 469 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 SNX25Q9H3E2 840 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 SYNCQ9H7C4 482 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 STRIP2Q9ULQ0 834 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 PTPN22Q9Y2R2 807 aa22.74■■□□□ 1.23
SPAST-204ENST00000621856 HTTP42858 3142 aa22.73■■□□□ 1.23
SPAST-204ENST00000621856 A8MXQ7 604 aa22.73■■□□□ 1.23
SPAST-204ENST00000621856 HUS1O60921 280 aa22.73■■□□□ 1.23
SPAST-204ENST00000621856 SKIP12755 728 aa22.73■■□□□ 1.23
SPAST-204ENST00000621856 STILQ15468 1287 aa22.73■■□□□ 1.23
SPAST-204ENST00000621856 CYP4A22Q5TCH4 519 aa22.73■■□□□ 1.23
SPAST-204ENST00000621856 DCAF12L1Q5VU92 463 aa22.73■■□□□ 1.23
SPAST-204ENST00000621856 APPL2Q8NEU8 664 aa22.73■■□□□ 1.23
SPAST-204ENST00000621856 ALG3Q92685 438 aa22.73■■□□□ 1.23
SPAST-204ENST00000621856 CD101Q93033 1021 aa22.73■■□□□ 1.23
SPAST-204ENST00000621856 PNKPQ96T60 521 aa22.73■■□□□ 1.23
SPAST-204ENST00000621856 DNAI2Q9GZS0 605 aa22.73■■□□□ 1.23
SPAST-204ENST00000621856 A0A0U1RQF3 1178 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 CCDC66A2RUB6 948 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 DNM1LO00429 736 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 PROSCO94903 275 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 GJB6O95452 261 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 CTNNA1P35221 906 aaKnown RBP22.72■■□□□ 1.23
SPAST-204ENST00000621856 SLC1A1P43005 524 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 MARCKSL1P49006 195 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 SCNN1GP51170 649 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 ZNF211Q13398 564 aaPredicted RBP22.72■■□□□ 1.23
SPAST-204ENST00000621856 GOLGA7BQ2TAP0 167 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 PTPN20Q4JDL3 420 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 GSTCDQ8NEC7 633 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 UBA3Q8TBC4 463 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 TSPYL2Q9H2G4 693 aaPredicted RBP22.72■■□□□ 1.23
SPAST-204ENST00000621856 RSAD1Q9HA92 442 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 MIOSQ9NXC5 875 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 CYTH4Q9UIA0 394 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 TSPAN16Q9UKR8 245 aa22.72■■□□□ 1.23
SPAST-204ENST00000621856 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.72■■□□□ 1.23
SPAST-204ENST00000621856 LILRA4P59901 499 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 LCLAT1Q6UWP7 414 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 C12orf29Q8N999 325 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.71■■□□□ 1.23
SPAST-204ENST00000621856 RNPC3Q96LT9 517 aaKnown RBP22.71■■□□□ 1.23
SPAST-204ENST00000621856 DEFB118Q96PH6 123 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 L1RE1Q9UN81 338 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 NME7Q9Y5B8 376 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 PCDHA3Q9Y5H8 950 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 TUBBP07437 444 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 GNL1P36915 607 aaPredicted RBP22.71■■□□□ 1.23
SPAST-204ENST00000621856 CLCN6P51797 869 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 AFF1P51825 1210 aaKnown RBP22.71■■□□□ 1.23
SPAST-204ENST00000621856 TAP1Q03518 808 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 DCUN1D2Q6PH85 259 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 TRAF7Q6Q0C0 670 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 ADGRF2Q8IZF7 708 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 KBTBD7Q8WVZ9 684 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 C18orf8Q96DM3 657 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 SEZ6LQ9BYH1 1024 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 FAM49BQ9NUQ9 324 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 IP6K2Q9UHH9 426 aa22.71■■□□□ 1.23
SPAST-204ENST00000621856 TARSL2A2RTX5 802 aaKnown RBP22.7■■□□□ 1.22
SPAST-204ENST00000621856 GOLGA8SH3BPF8 625 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 PDGFRBP09619 1106 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 FGFR1P11362 822 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 PEX5P50542 639 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 PSMC1P62191 440 aaKnown RBP22.7■■□□□ 1.22
SPAST-204ENST00000621856 LONRF2Q1L5Z9 754 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 SEL1L2Q5TEA6 688 aa22.7■■□□□ 1.22
SPAST-204ENST00000621856 C8orf74Q6P047 294 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms