RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 NUMBLQ9Y6R0 609 aa15.18■□□□□ 0.02
LIG1-218ENST00000599322 KINO60870 393 aaKnown RBP15.17■□□□□ 0.02
LIG1-218ENST00000599322 P4HA1P13674 534 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 AVPR2P30518 371 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 WNT7BP56706 349 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 RPL10AP62906 217 aaKnown RBP15.17■□□□□ 0.02
LIG1-218ENST00000599322 PFKPQ01813 784 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 STIM1Q13586 685 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 HTR4Q13639 388 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 C4orf50Q6ZRC1 276 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 SPATA2LQ8IUW3 424 aaPredicted RBP15.17■□□□□ 0.02
LIG1-218ENST00000599322 NPAS3Q8IXF0 933 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 GUF1Q8N442 669 aaKnown RBP15.17■□□□□ 0.02
LIG1-218ENST00000599322 RSAD2Q8WXG1 361 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 SMARCE1Q969G3 411 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 SHDQ96IW2 340 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 TSG101Q99816 390 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 DNAI2Q9GZS0 605 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 SMOC2Q9H3U7 446 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 GOLPH3LQ9H4A5 285 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 WNT16Q9UBV4 365 aa15.17■□□□□ 0.02
LIG1-218ENST00000599322 DOCK8Q8NF50 2099 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 ANHXE9PGG2 379 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 CFHP08603 1231 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 FAM163BP0C2L3 166 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 PRR29P0C7W0 189 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 CCDC150Q8NCX0 1101 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 FLCNQ8NFG4 579 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 OR10T2Q8NGX3 314 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 TMEM174Q8WUU8 243 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 E2F7Q96AV8 911 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 TIGD1Q96MW7 591 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 GSDMAQ96QA5 445 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 TMEM209Q96SK2 561 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 IRF2BPLQ9H1B7 796 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 ZFP14Q9HCL3 533 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 CEP72Q9P209 647 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 SIX4Q9UIU6 781 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 L1RE1Q9UN81 338 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 MAPK8IP1Q9UQF2 711 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 TRAF3IP3Q9Y228 551 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 CACNA1HO95180 2353 aa15.16■□□□□ 0.02
LIG1-218ENST00000599322 ANK1P16157 1881 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 NR2F2P24468 414 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 NUBP1P53384 320 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 WDR72Q3MJ13 1102 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 INTS6LQ5JSJ4 861 aaKnown RBP15.15■□□□□ 0.02
LIG1-218ENST00000599322 PARM1Q6UWI2 310 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 INTS8Q75QN2 995 aaKnown RBP15.15■□□□□ 0.02
LIG1-218ENST00000599322 DNAJB7Q7Z6W7 309 aaPredicted RBP15.15■□□□□ 0.02
LIG1-218ENST00000599322 FMR1NBQ8N0W7 255 aaPredicted RBP15.15■□□□□ 0.02
LIG1-218ENST00000599322 TMC2Q8TDI7 906 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 PARD3BQ8TEW8 1205 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 PSMG2Q969U7 264 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 IMPG2Q9BZV3 1241 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 KCTD10Q9H3F6 313 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 ATXN3LQ9H3M9 355 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 ABCB6Q9NP58 842 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 FAM86C1Q9NVL1 165 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 DMAC2Q9NW81 257 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 CHMP5Q9NZZ3 219 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 ZMYM5Q9UJ78 669 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 CDH9Q9ULB4 789 aa15.15■□□□□ 0.02
LIG1-218ENST00000599322 DOCK6Q96HP0 2047 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 DPYSL4O14531 572 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 IKBKBO14920 756 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 CETN3O15182 167 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 MAPK13O15264 365 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 ECI2O75521 394 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 CSH1P0DML2 217 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 CSH2P0DML3 217 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 HAPLN1P10915 354 aaPredicted RBP15.14■□□□□ 0.01
LIG1-218ENST00000599322 CEBPBP17676 345 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 CDC25CP30307 473 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 PSMC2P35998 433 aaKnown RBP15.14■□□□□ 0.01
LIG1-218ENST00000599322 GNL1P36915 607 aaPredicted RBP15.14■□□□□ 0.01
LIG1-218ENST00000599322 PPP1R2P41236 205 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 CLCN5P51795 746 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 EPHA5P54756 1037 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 ADAM9Q13443 819 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 PNOCQ13519 176 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 SOWAHAQ2M3V2 549 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 ZNF699Q32M78 642 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 ZNF667Q5HYK9 610 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 PRSS36Q5K4E3 855 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 YAF2Q8IY57 180 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 HS6ST3Q8IZP7 471 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 SIX5Q8N196 739 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 OR6B3Q8NGW1 331 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 FGF14Q92915 247 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 ELSPBP1Q96BH3 223 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 RTP3Q9BQQ7 232 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 SYT15Q9BQS2 421 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 EHD2Q9NZN4 543 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 MAGEC2Q9UBF1 373 aaPredicted RBP15.14■□□□□ 0.01
LIG1-218ENST00000599322 UXTQ9UBK9 157 aaPredicted RBP15.14■□□□□ 0.01
LIG1-218ENST00000599322 NXF1Q9UBU9 619 aaKnown RBP15.14■□□□□ 0.01
LIG1-218ENST00000599322 GTF3C4Q9UKN8 822 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 MYO15AQ9UKN7 3530 aa15.14■□□□□ 0.01
LIG1-218ENST00000599322 PTPRJQ12913 1337 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms