RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 RSPRY1Q96DX4 576 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 PKMYT1Q99640 499 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 SLC39A2Q9NP94 309 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 GDAP2Q9NXN4 497 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 KIAA1549LQ6ZVL6 1849 aa14.05□□□□□ -0.16
LIG1-212ENST00000596549 MYO16Q9Y6X6 1858 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 DMDP11532 3685 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 PVALEFA0A1B0GWK0 134 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 SLFN14P0C7P3 912 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 HAPLN1P10915 354 aaPredicted RBP14.04□□□□□ -0.16
LIG1-212ENST00000596549 ACAT1P24752 427 aaKnown RBP14.04□□□□□ -0.16
LIG1-212ENST00000596549 ALDH1A3P47895 512 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 CYP2J2P51589 502 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 KRT85P78386 507 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 SNRNP35Q16560 246 aaKnown RBP14.04□□□□□ -0.16
LIG1-212ENST00000596549 MGAT5BQ3V5L5 792 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 WDR49Q8IV35 697 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 CEP57L1Q8IYX8 460 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 THEM5Q8N1Q8 247 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 SPPL2BQ8TCT7 592 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 CACTINQ8WUQ7 758 aaKnown RBP14.04□□□□□ -0.16
LIG1-212ENST00000596549 ATOH1Q92858 354 aaPredicted RBP14.04□□□□□ -0.16
LIG1-212ENST00000596549 SMARCD2Q92925 531 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 PAGE5Q96GU1 130 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 ANKRD36BP1Q96IX9 119 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 SPATA32Q96LK8 384 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 IL21Q9HBE4 155 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 ZFP14Q9HCL3 533 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 DDX43Q9NXZ2 648 aaKnown RBP14.04□□□□□ -0.16
LIG1-212ENST00000596549 ABI2Q9NYB9 513 aaPredicted RBP14.04□□□□□ -0.16
LIG1-212ENST00000596549 SNX9Q9Y5X1 595 aa14.04□□□□□ -0.16
LIG1-212ENST00000596549 FAM237AA0A1B0GTK4 181 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 RFX1P22670 979 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 GABRR2P28476 465 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 VIPR2P41587 438 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 GPR15P49685 360 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 CYP4F8P98187 520 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 PFKPQ01813 784 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 PRKCQQ04759 706 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 CYP24A1Q07973 514 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 STK4Q13043 487 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 PSMD6Q15008 389 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 ANGPT1Q15389 498 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 SOWAHAQ2M3V2 549 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 SLC44A4Q53GD3 710 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 INTS6LQ5JSJ4 861 aaKnown RBP14.03□□□□□ -0.16
LIG1-212ENST00000596549 TPRG1Q6ZUI0 275 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 LIMS2Q7Z4I7 341 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 DNAJB7Q7Z6W7 309 aaPredicted RBP14.03□□□□□ -0.16
LIG1-212ENST00000596549 C12orf56Q8IXR9 622 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 ADGRF2Q8IZF7 708 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 XXYLT1Q8NBI6 393 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 RDH13Q8NBN7 331 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 PLEKHO2Q8TD55 490 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 C2orf15Q8WU43 125 aaKnown RBP14.03□□□□□ -0.16
LIG1-212ENST00000596549 KBTBD7Q8WVZ9 684 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 DNASE1L2Q92874 299 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 CGRRF1Q99675 332 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 TRPV4Q9HBA0 871 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 LTB4R2Q9NPC1 389 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 HEBP1Q9NRV9 189 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 MTF2Q9Y483 593 aaPredicted RBP14.03□□□□□ -0.16
LIG1-212ENST00000596549 ASB3Q9Y575 518 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 NME7Q9Y5B8 376 aa14.03□□□□□ -0.16
LIG1-212ENST00000596549 KANSL1LA0AUZ9 987 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 ARNTLO00327 626 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 STK25O00506 426 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 GABRDO14764 452 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 HUS1O60921 280 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 TNNC2P02585 160 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 CD72P21854 359 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 CMA1P23946 247 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 TARSP26639 723 aaKnown RBP14.02□□□□□ -0.17
LIG1-212ENST00000596549 NBL1P41271 181 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 TUFMP49411 452 aaKnown RBP14.02□□□□□ -0.17
LIG1-212ENST00000596549 NDUFA8P51970 172 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 RBP5P82980 135 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 SURF1Q15526 300 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 KNOP1Q1ED39 458 aaKnown RBP14.02□□□□□ -0.17
LIG1-212ENST00000596549 KMT5BQ4FZB7 885 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 TMEM150AQ86TG1 271 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 TMEM86AQ8N2M4 240 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 TOP6BLQ8N6T0 577 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 GIPC2Q8TF65 315 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 ACBD6Q9BR61 282 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 PI4K2AQ9BTU6 479 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 IRF2BPLQ9H1B7 796 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 GOLPH3LQ9H4A5 285 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 SLITRK6Q9H5Y7 841 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 KIAA1586Q9HCI6 787 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 SIT1Q9Y3P8 196 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 CACNA1HO95180 2353 aa14.02□□□□□ -0.17
LIG1-212ENST00000596549 HEPACAM2A8MVW5 462 aa14.01□□□□□ -0.17
LIG1-212ENST00000596549 PROB1E7EW31 1015 aa14.01□□□□□ -0.17
LIG1-212ENST00000596549 TADA3O75528 432 aa14.01□□□□□ -0.17
LIG1-212ENST00000596549 PRAMEF12O95522 483 aa14.01□□□□□ -0.17
LIG1-212ENST00000596549 DLATP10515 647 aaKnown RBP14.01□□□□□ -0.17
LIG1-212ENST00000596549 HMGA1P17096 107 aaKnown RBP14.01□□□□□ -0.17
LIG1-212ENST00000596549 PSMC3P17980 439 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms