RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 CIZ1Q9ULV3 898 aaPredicted RBP10.64□□□□□ -0.71
SKA2-208ENST00000583927 L1RE1Q9UN81 338 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 TRAF3IP3Q9Y228 551 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 R3HCC1Q9Y3T6 440 aaKnown RBP10.64□□□□□ -0.71
SKA2-208ENST00000583927 NUMBLQ9Y6R0 609 aa10.64□□□□□ -0.71
SKA2-208ENST00000583927 EXOC3O60645 756 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 MOSPD3O75425 235 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 OR4Q2P0C623 313 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 TNNI1P19237 187 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 PCSK1P29120 753 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 WEE1P30291 646 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 AVPR2P30518 371 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 ATICP31939 592 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 PLA2G5P39877 138 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 CCR2P41597 374 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 CYP2J2P51589 502 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 MYL7Q01449 175 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 TSPY1Q01534 308 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 SOWAHAQ2M3V2 549 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 SLC39A12Q504Y0 691 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 COBLL1Q53SF7 1204 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 ASTLQ6HA08 431 aaPredicted RBP10.63□□□□□ -0.71
SKA2-208ENST00000583927 PHLDB3Q6NSJ2 640 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 PARM1Q6UWI2 310 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 ITIH5Q86UX2 942 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 LRRTM3Q86VH5 581 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 TMC8Q8IU68 726 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 ATAD1Q8NBU5 361 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 ENGASEQ8NFI3 743 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 SPATA20Q8TB22 786 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 RSAD2Q8WXG1 361 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 ELSPBP1Q96BH3 223 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 FUBP3Q96I24 572 aaKnown RBP eCLIP10.63□□□□□ -0.71
SKA2-208ENST00000583927 HPDLQ96IR7 371 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 CEP295NLQ96MC4 621 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 TIGD1Q96MW7 591 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 ASB16Q96NS5 453 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 PGLYRP2Q96PD5 576 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 PKMYT1Q99640 499 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 GTPBP4Q9BZE4 634 aaKnown RBP10.63□□□□□ -0.71
SKA2-208ENST00000583927 SMOC2Q9H3U7 446 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 RAPGEFL1Q9UHV5 662 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 SNX9Q9Y5X1 595 aa10.63□□□□□ -0.71
SKA2-208ENST00000583927 FRYLO94915 3013 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 SOBPA7XYQ1 873 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 IKBKBO14920 756 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 NARSO43776 548 aaKnown RBP10.62□□□□□ -0.71
SKA2-208ENST00000583927 CALUO43852 315 aaPredicted RBP10.62□□□□□ -0.71
SKA2-208ENST00000583927 TACC1O75410 805 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 KRT19P08727 400 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 PRR29P0C7W0 189 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 DLATP10515 647 aaKnown RBP10.62□□□□□ -0.71
SKA2-208ENST00000583927 HAPLN1P10915 354 aaPredicted RBP10.62□□□□□ -0.71
SKA2-208ENST00000583927 CEBPBP17676 345 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 AOC1P19801 751 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 PFKPQ01813 784 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 BFSP1Q12934 665 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 SNW1Q13573 536 aaKnown RBP10.62□□□□□ -0.71
SKA2-208ENST00000583927 CFAP221Q4G0U5 840 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 INTS6LQ5JSJ4 861 aaKnown RBP10.62□□□□□ -0.71
SKA2-208ENST00000583927 LMBRD2Q68DH5 695 aaPredicted RBP10.62□□□□□ -0.71
SKA2-208ENST00000583927 SCARA3Q6AZY7 606 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 FAM171BQ6P995 826 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 DNAJB7Q7Z6W7 309 aaPredicted RBP10.62□□□□□ -0.71
SKA2-208ENST00000583927 ADGRF2Q8IZF7 708 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 RDH13Q8NBN7 331 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 TMC2Q8TDI7 906 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 NOC3LQ8WTT2 800 aaKnown RBP10.62□□□□□ -0.71
SKA2-208ENST00000583927 ZNF516Q92618 1163 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 E2F7Q96AV8 911 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 TCEAL4Q96EI5 215 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 GSDMAQ96QA5 445 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 IRF2BPLQ9H1B7 796 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 GDPD2Q9HCC8 539 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 DDX43Q9NXZ2 648 aaKnown RBP10.62□□□□□ -0.71
SKA2-208ENST00000583927 PCDHB5Q9Y5E4 795 aa10.62□□□□□ -0.71
SKA2-208ENST00000583927 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.61□□□□□ -0.71
SKA2-208ENST00000583927 KRBA1A5PL33 1030 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 GOLGA6L4A6NEF3 574 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 CST3P01034 146 aaPredicted RBP10.61□□□□□ -0.71
SKA2-208ENST00000583927 PDGFBP01127 241 aaPredicted RBP10.61□□□□□ -0.71
SKA2-208ENST00000583927 NR3C1P04150 777 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 NPR3P17342 541 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 WARSP23381 471 aaKnown RBP10.61□□□□□ -0.71
SKA2-208ENST00000583927 FCARP24071 287 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 STARD6P59095 220 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 FAM160A1Q05DH4 1040 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 VEPH1Q14D04 833 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 MAPRE1Q15691 268 aaKnown RBP10.61□□□□□ -0.71
SKA2-208ENST00000583927 EDRF1Q3B7T1 1238 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 CWF19L1Q69YN2 538 aaKnown RBP10.61□□□□□ -0.71
SKA2-208ENST00000583927 GAREM2Q75VX8 874 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 HS6ST3Q8IZP7 471 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 TTC9BQ8N6N2 239 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 SHKBP1Q8TBC3 707 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 KBTBD7Q8WVZ9 684 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 ING5Q8WYH8 240 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 SMARCD2Q92925 531 aa10.61□□□□□ -0.71
SKA2-208ENST00000583927 SYAP1Q96A49 352 aaPredicted RBP10.61□□□□□ -0.71
SKA2-208ENST00000583927 FAM122AQ96E09 287 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms