RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 UBE3AQ05086 875 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 ASTE1Q2TB18 679 aaPredicted RBP14.56□□□□□ -0.08
ITGB4-209ENST00000583327 LRIT3Q3SXY7 679 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 VARS2Q5ST30 1063 aaKnown RBP14.56□□□□□ -0.08
ITGB4-209ENST00000583327 CHRDL2Q6WN34 429 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 SPRED2Q7Z698 418 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 OR6B3Q8NGW1 331 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 EPS8L1Q8TE68 723 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 PIK3R5Q8WYR1 880 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 TGS1Q96RS0 853 aaKnown RBP14.56□□□□□ -0.08
ITGB4-209ENST00000583327 TTPALQ9BTX7 342 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 SNX25Q9H3E2 840 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 ARHGAP20Q9P2F6 1191 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 NOCTQ9UK39 431 aaKnown RBP14.56□□□□□ -0.08
ITGB4-209ENST00000583327 CDH9Q9ULB4 789 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 BACE2Q9Y5Z0 518 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 BZW2Q9Y6E2 419 aaKnown RBP14.56□□□□□ -0.08
ITGB4-209ENST00000583327 TSC2P49815 1807 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 A8MXQ7 604 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 SERPING1P05155 500 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 CCDC172P0C7W6 258 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 CTSAP10619 480 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 VDRP11473 427 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 KRT5P13647 590 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 CHRNB2P17787 502 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 PTPN1P18031 435 aaKnown RBP14.55□□□□□ -0.08
ITGB4-209ENST00000583327 PTK2Q05397 1052 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 MAPK8IP2Q13387 824 aaPredicted RBP14.55□□□□□ -0.08
ITGB4-209ENST00000583327 CAMK1Q14012 370 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 ASIC2Q16515 512 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 RSPO2Q6UXX9 243 aaPredicted RBP14.55□□□□□ -0.08
ITGB4-209ENST00000583327 ANKS3Q6ZW76 656 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 NOP9Q86U38 636 aaKnown RBP14.55□□□□□ -0.08
ITGB4-209ENST00000583327 LRRTM3Q86VH5 581 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 SLC47A2Q86VL8 602 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 LRRC8AQ8IWT6 810 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 OR10T2Q8NGX3 314 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 ZNF606Q8WXB4 792 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 TFAP2BQ92481 460 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 TNIP3Q96KP6 325 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 CHP1Q99653 195 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 ZCWPW1Q9H0M4 648 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 ZBP1Q9H171 429 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 DPEP3Q9H4B8 488 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 RXFP1Q9HBX9 757 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 ACP6Q9NPH0 428 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 CRTAC1Q9NQ79 661 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 MTRRQ9UBK8 725 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 MSRAQ9UJ68 235 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 IRAK3Q9Y616 596 aa14.55□□□□□ -0.08
ITGB4-209ENST00000583327 SSU72P8A0A1W2PR75 194 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 OR6C75A6NL08 312 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 GOLGA6L6A8MZA4 724 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 H3BNC9 293 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 ATP2C2O75185 946 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 PDGFRBP09619 1106 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 SKILP12757 684 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 PCSK1P29120 753 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 CTNNB1P35222 781 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 CNGA2Q16280 664 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 ZNF394Q53GI3 561 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 INTS6LQ5JSJ4 861 aaKnown RBP14.54□□□□□ -0.08
ITGB4-209ENST00000583327 ARHGAP17Q68EM7 881 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 SLC8B1Q6J4K2 584 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 PAQR9Q6ZVX9 377 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 ZNF571Q7Z3V5 609 aaPredicted RBP14.54□□□□□ -0.08
ITGB4-209ENST00000583327 ACOT1Q86TX2 421 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 ZNF677Q86XU0 584 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 VPS52Q8N1B4 723 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 THEM5Q8N1Q8 247 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 B3GALNT2Q8NCR0 500 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 SLC30A5Q8TAD4 765 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 MYCBPAPQ8TBZ2 947 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 B3GALT6Q96L58 329 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 NKX2-4Q9H2Z4 354 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 HAUS4Q9H6D7 363 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 FNIP2Q9P278 1114 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 PCDHGC3Q9UN70 934 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 GBF1Q92538 1859 aa14.54□□□□□ -0.08
ITGB4-209ENST00000583327 VWA8A3KMH1 1905 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 MYBPHLA2RUH7 354 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 H7C4K7 107 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 FSCN2O14926 492 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 CALCAP01258 141 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 PLEKP08567 350 aaPredicted RBP14.53□□□□□ -0.08
ITGB4-209ENST00000583327 ACAT1P24752 427 aaKnown RBP14.53□□□□□ -0.08
ITGB4-209ENST00000583327 DNAJB1P25685 340 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 ANXA13P27216 316 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 USP8P40818 1118 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 GLUD2P49448 558 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 CDR2Q01850 454 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 KLHL30Q0D2K2 578 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 PKDCCQ504Y2 493 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 LCLAT1Q6UWP7 414 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 CEP57Q86XR8 500 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 C12orf29Q8N999 325 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 HEXIM2Q96MH2 286 aaKnown RBP14.53□□□□□ -0.08
ITGB4-209ENST00000583327 TMEM209Q96SK2 561 aa14.53□□□□□ -0.08
ITGB4-209ENST00000583327 HNRNPABQ99729 332 aaKnown RBP14.53□□□□□ -0.08
ITGB4-209ENST00000583327 AGPAT1Q99943 283 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms