RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ADARP55265 1226 aaKnown RBP11.43□□□□□ -0.58
PALB2-206ENST00000568219 WDR78Q5VTH9 848 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 APLFQ8IW19 511 aaPredicted RBP11.43□□□□□ -0.58
PALB2-206ENST00000568219 KLHL23Q8NBE8 558 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 ECSITQ9BQ95 431 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 SAR1AQ9NR31 198 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 TTLL3Q9Y4R7 772 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 AK5Q9Y6K8 562 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 WFS1O76024 890 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 GZMAP12544 262 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 ESRRGP62508 458 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 CDK16Q00536 496 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 POU5F1Q01860 360 aaKnown RBP11.43□□□□□ -0.58
PALB2-206ENST00000568219 FAAP100Q0VG06 881 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 AP1B1Q10567 949 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 CCNG2Q16589 344 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 SLC5A9Q2M3M2 681 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 SGSM1Q2NKQ1 1148 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 MFSD7Q6UXD7 560 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 DCUN1D5Q9BTE7 237 aa11.43□□□□□ -0.58
PALB2-206ENST00000568219 MRPL1Q9BYD6 325 aaKnown RBP11.43□□□□□ -0.58
PALB2-206ENST00000568219 MMADHCQ9H3L0 296 aaPredicted RBP11.43□□□□□ -0.58
PALB2-206ENST00000568219 C2CD2LO14523 706 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 FGRP09769 529 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 PHEXP78562 749 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 GEN1Q17RS7 908 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 PLA2G4FQ68DD2 849 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 TRIM67Q6ZTA4 783 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 DEFB107AQ8IZN7 70 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 FAM192AQ9GZU8 254 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 CCDC134Q9H6E4 229 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 ADA2Q9NZK5 511 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 NID2Q14112 1375 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 KAT6AQ92794 2004 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 SYNJ2BP-COX16A0A087WUM0 186 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 KRT38O76015 456 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 ASMTLO95671 621 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 VAV1P15498 845 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 SLC1A1P43005 524 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 TPD52P55327 224 aaPredicted RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 EIF3EP60228 445 aaKnown RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 PTK6Q13882 451 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 UBAP2LQ14157 1087 aaKnown RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 SEZ6Q53EL9 994 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 TRAPPC3LQ5T215 181 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 CYP4A22Q5TCH4 519 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 C16orf87Q6PH81 154 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 RBM44Q6ZP01 1051 aaKnown RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 ZBTB33Q86T24 672 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 SATL1Q86VE3 508 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 SEPT12Q8IYM1 358 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 ZDHHC14Q8IZN3 488 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 RBM15BQ8NDT2 890 aaKnown RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 SCYL1Q96KG9 808 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 KLHL4Q9C0H6 718 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 TRPV6Q9H1D0 765 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 TSPYL2Q9H2G4 693 aaPredicted RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 COX16Q9P0S2 106 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 SEL1LQ9UBV2 794 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 NCANO14594 1321 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 H0YIN7 160 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 RAD17O75943 681 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 HSPA4LO95757 839 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 RBP3P10745 1247 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 CCNB1P14635 433 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 RFX1P22670 979 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 STAT2P52630 851 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 MARSP56192 900 aaKnown RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 SOX10P56693 466 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 TFAMQ00059 246 aaKnown RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 SF3B3Q15393 1217 aaKnown RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 TRMT5Q32P41 509 aaKnown RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 EFHC1Q5JVL4 640 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 CXorf38Q8TB03 319 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 ERLEC1Q96DZ1 483 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 ZNF668Q96K58 619 aaPredicted RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 CCT7Q99832 543 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 TMEM109Q9BVC6 243 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 THEGQ9P2T0 379 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 ZC3H7BQ9UGR2 993 aaKnown RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 CCNL1Q9UK58 526 aaPredicted RBP11.42□□□□□ -0.58
PALB2-206ENST00000568219 SCINQ9Y6U3 715 aa11.42□□□□□ -0.58
PALB2-206ENST00000568219 MYH2Q9UKX2 1941 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 NDC80O14777 642 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 TMCC1O94876 653 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 SPATA31C1P0DKV0 1188 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 EEF1B2P24534 225 aaKnown RBP11.41□□□□□ -0.58
PALB2-206ENST00000568219 JAM2P57087 298 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 CENPCQ03188 943 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 PPIDQ08752 370 aaKnown RBP11.41□□□□□ -0.58
PALB2-206ENST00000568219 INTS5Q6P9B9 1019 aaKnown RBP11.41□□□□□ -0.58
PALB2-206ENST00000568219 DENND5BQ6ZUT9 1274 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 POLNQ7Z5Q5 900 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 SLC51AQ86UW1 340 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 LRRN4Q8WUT4 740 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 EBF3Q9H4W6 596 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 DBNDD1Q9H9R9 158 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 STX18Q9P2W9 335 aaKnown RBP11.41□□□□□ -0.58
PALB2-206ENST00000568219 MRC1P22897 1456 aa11.41□□□□□ -0.58
PALB2-206ENST00000568219 PPP1R11O60927 126 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms