RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 ARNTL2Q8WYA1 636 aa15.79■□□□□ 0.12
SPG7-213ENST00000566221 RIN2Q8WYP3 895 aaPredicted RBP15.79■□□□□ 0.12
SPG7-213ENST00000566221 B3GALT6Q96L58 329 aa15.79■□□□□ 0.12
SPG7-213ENST00000566221 ALG13Q9NP73 1137 aaKnown RBP15.79■□□□□ 0.12
SPG7-213ENST00000566221 TLR9Q9NR96 1032 aa15.79■□□□□ 0.12
SPG7-213ENST00000566221 MRPL17Q9NRX2 175 aaKnown RBP15.79■□□□□ 0.12
SPG7-213ENST00000566221 DDX43Q9NXZ2 648 aaKnown RBP15.79■□□□□ 0.12
SPG7-213ENST00000566221 CAPN11Q9UMQ6 739 aa15.79■□□□□ 0.12
SPG7-213ENST00000566221 CNTN6Q9UQ52 1028 aa15.79■□□□□ 0.12
SPG7-213ENST00000566221 SSX2IPQ9Y2D8 614 aa15.79■□□□□ 0.12
SPG7-213ENST00000566221 PCDHB4Q9Y5E5 795 aa15.79■□□□□ 0.12
SPG7-213ENST00000566221 PATJQ8NI35 1801 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 OR6C75A6NL08 312 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 CTSAP10619 480 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 KRT5P13647 590 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 STAT1P42224 750 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 ZBED6P86452 979 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 TBX2Q13207 712 aaPredicted RBP15.78■□□□□ 0.12
SPG7-213ENST00000566221 MRPL58Q14197 206 aaKnown RBP15.78■□□□□ 0.12
SPG7-213ENST00000566221 CTXN3Q4LDR2 81 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 TMEM270Q6UE05 265 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 OSTM1Q86WC4 334 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 RBBP8NLQ8NC74 664 aaPredicted RBP15.78■□□□□ 0.12
SPG7-213ENST00000566221 POF1BQ8WVV4 589 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 BAP1Q92560 729 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 TNIP3Q96KP6 325 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 NT5C1AQ9BXI3 368 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 GPR88Q9GZN0 384 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 LMAN2LQ9H0V9 348 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 NUCKS1Q9H1E3 243 aaKnown RBP15.78■□□□□ 0.12
SPG7-213ENST00000566221 CERS4Q9HA82 394 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 ENTPD7Q9NQZ7 604 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.78■□□□□ 0.12
SPG7-213ENST00000566221 IMPACTQ9P2X3 320 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 MTRRQ9UBK8 725 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 HMGXB4Q9UGU5 601 aa15.78■□□□□ 0.12
SPG7-213ENST00000566221 LUC7L2Q9Y383 392 aaKnown RBP15.78■□□□□ 0.12
SPG7-213ENST00000566221 GRM6O15303 877 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 CASP14P31944 242 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 SOX5P35711 763 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 USP8P40818 1118 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 ZNF132P52740 706 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 TSPY1Q01534 308 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 SMC1AQ14683 1233 aaKnown RBP15.77■□□□□ 0.12
SPG7-213ENST00000566221 PTPN14Q15678 1187 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 KIAA0319Q5VV43 1072 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 PDE12Q6L8Q7 609 aaKnown RBP15.77■□□□□ 0.12
SPG7-213ENST00000566221 PRSS55Q6UWB4 352 aaPredicted RBP15.77■□□□□ 0.12
SPG7-213ENST00000566221 TMC7Q7Z402 723 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 CNGA4Q8IV77 575 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 FAM71AQ8IYT1 594 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 LNX1Q8TBB1 728 aaPredicted RBP15.77■□□□□ 0.12
SPG7-213ENST00000566221 WHAMMQ8TF30 809 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 GDPD5Q8WTR4 605 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 CPLX3Q8WVH0 158 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 TCF25Q9BQ70 676 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 RTP3Q9BQQ7 232 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 SYT15Q9BQS2 421 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 ACBD6Q9BR61 282 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 CDH9Q9ULB4 789 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 BACE2Q9Y5Z0 518 aa15.77■□□□□ 0.12
SPG7-213ENST00000566221 LRRC53A6NM62 1247 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 FOXN3O00409 490 aaPredicted RBP15.76■□□□□ 0.11
SPG7-213ENST00000566221 C2CD2LO14523 706 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 FSCN2O14926 492 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 LPXNO60711 386 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 MFAP3LO75121 409 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 PAEPP09466 180 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 PDGFRBP09619 1106 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 PNMA6AP0CW24 399 aaPredicted RBP15.76■□□□□ 0.11
SPG7-213ENST00000566221 DNAJB1P25685 340 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 LMO2P25791 158 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 RAD23BP54727 409 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 ZNF394Q53GI3 561 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 INTS6LQ5JSJ4 861 aaKnown RBP15.76■□□□□ 0.11
SPG7-213ENST00000566221 ZNF697Q5TEC3 545 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 SLC4A11Q8NBS3 891 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 B3GALNT2Q8NCR0 500 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 TMEM176AQ96HP8 235 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 ELOVL4Q9GZR5 314 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 ZNF576Q9H609 170 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 NGRNQ9NPE2 291 aaKnown RBP15.76■□□□□ 0.11
SPG7-213ENST00000566221 FNIP2Q9P278 1114 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 NME7Q9Y5B8 376 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 IRAK3Q9Y616 596 aa15.76■□□□□ 0.11
SPG7-213ENST00000566221 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.75■□□□□ 0.11
SPG7-213ENST00000566221 EPOPA6NHQ4 379 aa15.75■□□□□ 0.11
SPG7-213ENST00000566221 AKR1B15C9JRZ8 316 aaPredicted RBP15.75■□□□□ 0.11
SPG7-213ENST00000566221 HCRTO43612 131 aa15.75■□□□□ 0.11
SPG7-213ENST00000566221 TBC1D4O60343 1298 aa15.75■□□□□ 0.11
SPG7-213ENST00000566221 GFPT2O94808 682 aa15.75■□□□□ 0.11
SPG7-213ENST00000566221 CCDC172P0C7W6 258 aa15.75■□□□□ 0.11
SPG7-213ENST00000566221 FERP16591 822 aa15.75■□□□□ 0.11
SPG7-213ENST00000566221 ACAT1P24752 427 aaKnown RBP15.75■□□□□ 0.11
SPG7-213ENST00000566221 CA8P35219 290 aa15.75■□□□□ 0.11
SPG7-213ENST00000566221 KRT9P35527 623 aa15.75■□□□□ 0.11
SPG7-213ENST00000566221 BPIFB4P59827 614 aa15.75■□□□□ 0.11
SPG7-213ENST00000566221 ERVFC1P60507 584 aa15.75■□□□□ 0.11
SPG7-213ENST00000566221 PSMC1P62191 440 aaKnown RBP15.75■□□□□ 0.11
SPG7-213ENST00000566221 MAPRE1Q15691 268 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms