RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	TCAF1	Q9Y4C2	921 aa		6.57	□□□□□ -1.36
TCF12-223	ENST00000561235	LOC102724159	A0A0B4J2E5	919 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235		A0A1W2PPC4	97 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	MBD3L4	A6NDZ8	208 aa	Predicted RBP	6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	MBD3L3	A6NE82	208 aa	Predicted RBP	6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	FAM20B	O75063	409 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	RASSF9	O75901	435 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	FGF18	O76093	207 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	GPANK1	O95872	356 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	ANXA2	P07355	339 aa	Known RBP	6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	ELANE	P08246	267 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	FGFR2	P21802	821 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	KLRC1	P26715	233 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	PPM1A	P35813	382 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	IL6ST	P40189	918 aa	Predicted RBP	6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	CARS	P49589	748 aa	Known RBP	6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	SELENOP	P49908	381 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	MAPK10	P53779	464 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	FAM189B	P81408	668 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	MC2R	Q01718	297 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	PLP2	Q04941	152 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	BTK	Q06187	659 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	PIGF	Q07326	219 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	PWP2	Q15269	919 aa	Known RBP	6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	ARL13B	Q3SXY8	428 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	LONRF3	Q496Y0	759 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	DGKK	Q5KSL6	1271 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	RRAGB	Q5VZM2	374 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	TAF2	Q6P1X5	1199 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	GDF7	Q7Z4P5	450 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	MAPKAPK5	Q8IW41	473 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	SMC5	Q8IY18	1101 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	CHST13	Q8NET6	341 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	POF1B	Q8WVV4	589 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	DCLRE1C	Q96SD1	692 aa	Known RBP	6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	ARFGAP3	Q9NP61	516 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	TBC1D23	Q9NUY8	699 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	CTTNBP2NL	Q9P2B4	639 aa		6.56	□□□□□ -1.36
TCF12-223	ENST00000561235	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	CCDC195	A0A1B0GUA6	201 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	KRTAP9-7	A8MTY7	169 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235		K7ESM1	405 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	IFRD1	O00458	451 aa	Predicted RBP	6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	ERN1	O75460	977 aa	Known RBP	6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	EIF3J	O75822	258 aa	Known RBP	6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	SUN1	O94901	812 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	SPATA31D3	P0C874	917 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	SLC35G1	Q2M3R5	365 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	GRAMD1B	Q3KR37	738 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	FOXR2	Q6PJQ5	311 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	LRRC55	Q6ZSA7	311 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	SPATA31D4	Q6ZUB0	917 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	CERS3	Q8IU89	383 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	PALM2	Q8IXS6	379 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	TXLNB	Q8N3L3	684 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	BRI3BP	Q8WY22	251 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	ZC3H10	Q96K80	434 aa	Known RBP	6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	C8orf49	Q96NF6	230 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	COLEC11	Q9BWP8	271 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	WDR12	Q9GZL7	423 aa	Known RBP	6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	AS3MT	Q9HBK9	375 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	TRMT13	Q9NUP7	481 aa	Known RBP	6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	MYO1A	Q9UBC5	1043 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	HDAC9	Q9UKV0	1011 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	MAP3K2	Q9Y2U5	619 aa		6.55	□□□□□ -1.36
TCF12-223	ENST00000561235	THOC2	Q8NI27	1593 aa	Known RBP	6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	DIRC3	C9JPN6	131 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	TRIM24	O15164	1050 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	NCR1	O76036	304 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	RECQL4	O94761	1208 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	ZFPL1	O95159	310 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	ACRV1	P26436	265 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	VIPR2	P41587	438 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	HSPA7	P48741	367 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	ZNF134	P52741	427 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	TOB2	Q14106	344 aa	Predicted RBP	6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	IQCB1	Q15051	598 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	PRKD1	Q15139	912 aa	Predicted RBP	6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	RABL3	Q5HYI8	236 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	B3GNTL1	Q67FW5	361 aa	Predicted RBP	6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	ERAP2	Q6P179	960 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	RNF44	Q7L0R7	432 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	ZNF280B	Q86YH2	543 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235		Q8NA96	180 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	POC1B	Q8TC44	478 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	SPSB4	Q96A44	273 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	KLC2	Q9H0B6	622 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	SERHL	Q9NQF3	203 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	ZNF212	Q9UDV6	495 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	MID2	Q9UJV3	735 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	MTO1	Q9Y2Z2	717 aa	Known RBP	6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	PAXBP1	Q9Y5B6	917 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	RAD54B	Q9Y620	910 aa		6.54	□□□□□ -1.36
TCF12-223	ENST00000561235	TOR1B	O14657	336 aa		6.53	□□□□□ -1.36
TCF12-223	ENST00000561235	THAP12	O43422	761 aa		6.53	□□□□□ -1.36
TCF12-223	ENST00000561235	TXN	P10599	105 aa	Known RBP	6.53	□□□□□ -1.36
TCF12-223	ENST00000561235	KCNA2	P16389	499 aa		6.53	□□□□□ -1.36
TCF12-223	ENST00000561235	GCLC	P48506	637 aa	Predicted RBP	6.53	□□□□□ -1.36
TCF12-223	ENST00000561235	LILRA4	P59901	499 aa		6.53	□□□□□ -1.36
TCF12-223	ENST00000561235	TRIM14	Q14142	442 aa		6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms