RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 SLFN14P0C7P3 912 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 CD72P21854 359 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 ALDH1A3P47895 512 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 EPHB3P54753 998 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 SNRPFP62306 86 aaKnown RBP17.19■□□□□ 0.34
LMX1B-204ENST00000561065 FRMD5Q7Z6J6 570 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 LRRC52Q8N7C0 313 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 STKLD1Q8NE28 680 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 ZNF507Q8TCN5 953 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 TRPV4Q9HBA0 871 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 IL21Q9HBE4 155 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 ZFP14Q9HCL3 533 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 HEBP1Q9NRV9 189 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 AGPAT3Q9NRZ7 376 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 HSFX1Q9UBD0 423 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 ITGA11Q9UKX5 1188 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 SIT1Q9Y3P8 196 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 GREB1Q4ZG55 1949 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 F5P12259 2224 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 KANSL1LA0AUZ9 987 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 ACTN4O43707 911 aaKnown RBP17.18■□□□□ 0.34
LMX1B-204ENST00000561065 GFRA3O60609 400 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 UBE4BO95155 1302 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 TARSP26639 723 aaKnown RBP17.18■□□□□ 0.34
LMX1B-204ENST00000561065 PNPLA4P41247 253 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 AFMP43652 599 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 PFKPQ01813 784 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 PRKCQQ04759 706 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 BFSP1Q12934 665 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 MGAT5BQ3V5L5 792 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 TPRG1Q6ZUI0 275 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 ASCL5Q7RTU5 278 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 DNAJB7Q7Z6W7 309 aaPredicted RBP17.18■□□□□ 0.34
LMX1B-204ENST00000561065 METTL23Q86XA0 190 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 NELFCDQ8IXH7 590 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 CACTINQ8WUQ7 758 aaKnown RBP17.18■□□□□ 0.34
LMX1B-204ENST00000561065 PKMYT1Q99640 499 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 GZF1Q9H116 711 aaPredicted RBP17.18■□□□□ 0.34
LMX1B-204ENST00000561065 KIAA1586Q9HCI6 787 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 LTB4R2Q9NPC1 389 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 INTS13Q9NVM9 706 aa17.18■□□□□ 0.34
LMX1B-204ENST00000561065 ABI2Q9NYB9 513 aaPredicted RBP17.18■□□□□ 0.34
LMX1B-204ENST00000561065 R3HCC1Q9Y3T6 440 aaKnown RBP17.18■□□□□ 0.34
LMX1B-204ENST00000561065 ARNTLO00327 626 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 KLRC4O43908 158 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 KRT19P08727 400 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 TMEM191BP0C7N4 346 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 HAPLN1P10915 354 aaPredicted RBP17.17■□□□□ 0.34
LMX1B-204ENST00000561065 ACAT1P24752 427 aaKnown RBP17.17■□□□□ 0.34
LMX1B-204ENST00000561065 GABRR2P28476 465 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 SYKP43405 635 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 GPR15P49685 360 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 CYP4F8P98187 520 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 PSMD2Q13200 908 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 BMT2Q1RMZ1 405 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 CSGALNACT2Q8N6G5 542 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 DNASE1L2Q92874 299 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 SHDQ96IW2 340 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 SLITRK6Q9H5Y7 841 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 GDAP2Q9NXN4 497 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 CGNQ9P2M7 1197 aaKnown RBP17.17■□□□□ 0.34
LMX1B-204ENST00000561065 SERTAD1Q9UHV2 236 aa17.17■□□□□ 0.34
LMX1B-204ENST00000561065 ZNF638Q14966 1978 aaKnown RBP17.16■□□□□ 0.34
LMX1B-204ENST00000561065 ANAPC1Q9H1A4 1944 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 A0A1W2PQ27 194 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 A0A1W2PQ64 194 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 A0A1W2PQD8 194 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 PRR23AA6NEV1 266 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 ZNF233A6NK53 670 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 HEPACAM2A8MVW5 462 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 CLIC2O15247 247 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 KIF20AO95235 890 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 PRAMEF12O95522 483 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 UBXN2BQ14CS0 331 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 HS2ST1Q7LGA3 356 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 GPIHBP1Q8IV16 184 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 ADGRF2Q8IZF7 708 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 MAML2Q8IZL2 1156 aaPredicted RBP17.16■□□□□ 0.34
LMX1B-204ENST00000561065 THEM5Q8N1Q8 247 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 SPPL2BQ8TCT7 592 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 GIPC2Q8TF65 315 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 LRRC3BQ96PB8 259 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 SLC39A2Q9NP94 309 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 DDX43Q9NXZ2 648 aaKnown RBP17.16■□□□□ 0.34
LMX1B-204ENST00000561065 ASB3Q9Y575 518 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 SNX9Q9Y5X1 595 aa17.16■□□□□ 0.34
LMX1B-204ENST00000561065 PFKFB1P16118 471 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 PSMC3P17980 439 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 GDI1P31150 447 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 CYP2J2P51589 502 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 SURF1Q15526 300 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 SNRNP35Q16560 246 aaKnown RBP17.15■□□□□ 0.34
LMX1B-204ENST00000561065 SOWAHAQ2M3V2 549 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 INTS6LQ5JSJ4 861 aaKnown RBP17.15■□□□□ 0.34
LMX1B-204ENST00000561065 LIMS2Q7Z4I7 341 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 TMEM150AQ86TG1 271 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 WDR49Q8IV35 697 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 ZNF687Q8N1G0 1237 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 KIAA0895Q8NCT3 520 aa17.15■□□□□ 0.34
LMX1B-204ENST00000561065 GOLGA5Q8TBA6 731 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms