RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 CXCL14O95715 111 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 EFEMP2O95967 443 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 GYPCP04921 128 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 ADH1AP07327 375 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 CCDC172P0C7W6 258 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 CD19P15391 556 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 RPL17P18621 184 aaKnown RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 ACO1P21399 889 aaKnown RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 ACAT1P24752 427 aaKnown RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 NDUFV1P49821 464 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 ERVFC1P60507 584 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 PSMC1P62191 440 aaKnown RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 ORC1Q13415 861 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 MRPL58Q14197 206 aaKnown RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 MAPRE1Q15691 268 aaKnown RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 TSR1Q2NL82 804 aaKnown RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 ZNF394Q53GI3 561 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 INTS6LQ5JSJ4 861 aaKnown RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 KIAA0319Q5VV43 1072 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 SMYD5Q6GMV2 418 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 PDE12Q6L8Q7 609 aaKnown RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 DPY19L2P1Q6NXN4 242 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 GLYCTKQ8IVS8 523 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 UBR7Q8N806 425 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 LNX1Q8TBB1 728 aaPredicted RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 CPLX3Q8WVH0 158 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 SHC3Q92529 594 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 PPP2R3CQ969Q6 453 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 TMEM176AQ96HP8 235 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 ACBD6Q9BR61 282 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 NAA15Q9BXJ9 866 aaKnown RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 EDEM3Q9BZQ6 932 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 NUCKS1Q9H1E3 243 aaKnown RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 HMGXB4Q9UGU5 601 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 AJAP1Q9UKB5 411 aaPredicted RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 CDH9Q9ULB4 789 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 MYO6Q9UM54 1294 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 STXBP5LQ9Y2K9 1186 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 LUC7L2Q9Y383 392 aaKnown RBP7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 BACE2Q9Y5Z0 518 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 CDY1Q9Y6F8 540 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 KIAA1671Q9BY89 1806 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 SCN1AP35498 2009 aa7.03□□□□□ -1.28
CHRNA3-204ENST00000559002 ATP8B3O60423 1300 aa7.02□□□□□ -1.28
CHRNA3-204ENST00000559002 GBF1Q92538 1859 aa7.02□□□□□ -1.28
CHRNA3-204ENST00000559002 C2orf71A6NGG8 1288 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 EPOPA6NHQ4 379 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 LRRC53A6NM62 1247 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 AKR1B15C9JRZ8 316 aaPredicted RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 RFXAPO00287 272 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 FOXN3O00409 490 aaPredicted RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 FSCN2O14926 492 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 TEX28O15482 410 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 HCRTO43612 131 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 GFPT2O94808 682 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 PAEPP09466 180 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 OR4Q2P0C623 313 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 PNMA6AP0CW24 399 aaPredicted RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 FERP16591 822 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 PTPN1P18031 435 aaKnown RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 DNAJB1P25685 340 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 LMO2P25791 158 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 KLRC2P26717 231 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 GNA15P30679 374 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 CASP14P31944 242 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 OR1D2P34982 312 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 KRT9P35527 623 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 IRS1P35568 1242 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 SOX5P35711 763 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 PDE6CP51160 858 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 JAM2P57087 298 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 BPIFB4P59827 614 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 ZBED6P86452 979 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 ROR1Q01973 937 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 ARID5AQ03989 594 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 PTK2Q05397 1052 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 MAPK8IP2Q13387 824 aaPredicted RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 ASIC2Q16515 512 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 NFE2Q16621 373 aaPredicted RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 SLC39A12Q504Y0 691 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 SGO2Q562F6 1265 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 MDH1BQ5I0G3 518 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 HABP4Q5JVS0 413 aaKnown RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 SFMBT2Q5VUG0 894 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 SLC8B1Q6J4K2 584 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 C4orf50Q6ZRC1 276 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 ACOT1Q86TX2 421 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 SPATA2LQ8IUW3 424 aaPredicted RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 GPIHBP1Q8IV16 184 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 CNGA4Q8IV77 575 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 FAM71AQ8IYT1 594 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 MRPL43Q8N983 215 aaKnown RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 SLC4A11Q8NBS3 891 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 SPC24Q8NBT2 197 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 B3GALNT2Q8NCR0 500 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 OR10T2Q8NGX3 314 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 WHAMMQ8TF30 809 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 MYLPFQ96A32 169 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 MRPL38Q96DV4 380 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms